Mycobacteroides chelonae: BB28_07145
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Entry
BB28_07145 CDS
T04665
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
mche
Mycobacteroides chelonae
Pathway
mche03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mche00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BB28_07145
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mche03021
]
BB28_07145
03019 Messenger RNA biogenesis [BR:
mche03019
]
BB28_07145
Transcription machinery [BR:
mche03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
BB28_07145
Messenger RNA biogenesis [BR:
mche03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BB28_07145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
Spore_III_AA
AAA_25
NACHT
AAA_22
AAA
VWA_2
S1CSD-TOTE-2
CoV_NSP2_C
Motif
Other DBs
NCBI-ProteinID:
ANA97569
LinkDB
All DBs
Position
1411222..1413147
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AA seq
641 aa
AA seq
DB search
MTDTDLIATEAAPEAPEAPATASSDRSNKERRGDGLGALSTMVLPELRALASQVGVKGTS
GMRKGDLIAAIREHQGALGASKNNNQASQAQQPQASASAEVEQKEPAQKEPARNDQSESA
RSEPTQTTLDLPAEAPKSAPEADSGEGKDAETSGAPREGRGERRRNQNQNAEGERKQQNG
GRGNSENSENSGREGGSGSQNSDNQNQDNNQNQGNRGDDGEGRGRRGRRTRERRRGRDRN
TNEGGETELREDDVVQPVAGILDVLDNYAFVRTSGYLAGPNDVYVSMNLVRKNGLRRGDA
ITGAVRVPRDPDAGNQNQRQKFNPLVRLDSVNGGPVEDAKKRPDFTKLTPLYPNQRLRLE
TTTEKLTTRVIDLIMPIGKGQRALIVSPPKAGKTTIMQNIANAISANNPECHLMVVLVDE
RPEEVTDMQRSVKGEVIASTFDRPPSDHTQAAELAIERAKRLVEQGKDVVVLLDSITRLG
RAYNNASPASGRILSGGVDSTALYPPKRFLGAARNIEHGGSLTIIATAMVETGSTGDTVI
FEEFKGTGNAELKLDRKIAERRVFPAVDVNPSGTRKDELLMSGDEFAIVHKLRRVLSGLD
SHQAIDLLMSQLRKTKTNYEFLVQVSKNTPGSNGADEPQYS
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgatacggacctcatcgcgaccgaagccgccccggaagcccccgaggcgcccgcc
acagcctcctctgatcgctccaacaaggagcgtcggggtgacggactgggcgcgctgtcg
acgatggtgttgccggagttgcgtgcattggccagccaagtaggcgtcaagggcacctcc
ggaatgcgtaagggcgatctgatcgctgccattcgcgagcatcagggtgcgcttggcgcg
tcgaagaacaacaaccaggccagccaggcccagcagccacaggcctccgcgtcggctgag
gtggagcagaaggaaccggcacagaaggagccggcccggaacgaccagagcgaatccgct
cgatccgagcccactcagaccacactcgatctgcccgccgaggcgccgaagtccgctccg
gaagccgactccggtgagggcaaggacgccgagacctccggcgcgcctcgtgagggccgc
ggcgagcggcgtcgcaaccagaaccagaacgccgagggcgagcgcaagcagcagaacggt
ggccgggggaactcagagaactctgagaactcggggcgtgagggtggctcggggagccag
aactcggacaatcagaaccaggacaacaaccagaaccagggcaaccgtggcgatgacggt
gagggccggggccgccgtggtcgccgtacccgcgaacgccgtcgtggccgcgatcgcaac
accaacgagggtggtgagaccgagctgcgcgaggacgatgtcgtccagcccgtggccggc
attctggatgtgctcgacaactacgcgttcgtccggacgtccggatatctggccgggcca
aacgatgtgtacgtctcgatgaacctcgtccgcaagaacgggctgcgccgcggcgatgcc
atcaccggtgccgtgcgggtaccccgcgacccggatgccgggaatcagaaccagcgccag
aagttcaacccgctggtgcgcctcgattccgtgaacggtggcccggttgaggacgccaag
aagcgtcccgacttcaccaagctgaccccgctgtacccgaatcagcggctgcggctggaa
accaccaccgagaagctgacgactcgtgtgatcgacctgatcatgccgatcggcaagggg
cagcgcgcgctgatcgtgtctccgccgaaggccggtaagaccacgatcatgcagaacatc
gccaacgcgatctctgccaacaaccccgagtgccatctgatggtggtgctggtcgacgaa
cggcccgaagaggtcaccgacatgcagcgctcggtcaagggtgaggtcatcgcctccacc
ttcgatcgcccgccgtcagaccacactcaggctgccgagctcgccatcgagcgtgccaag
cgtctcgtggaacagggcaaggacgttgtggtcttgctcgactccatcacccgtctggga
cgtgcctacaacaacgcctcgccggcttccggccgcatcctgtccggtggtgtcgactcg
acggcgctgtacccgcccaagcggttcctgggcgcggcgcgcaacatcgagcacggcggc
tcgttgaccatcatcgccaccgcgatggttgagaccggatccaccggtgacacggtcatc
ttcgaggagttcaagggcaccggtaacgccgagctcaagctcgaccgcaagatcgccgaa
cgccgggtgttccccgccgtcgacgtcaacccgtcgggtactcgcaaggacgagctgctg
atgagcggcgacgagttcgcgatcgtgcacaagctgcgccgcgtgctctccggcctggat
tcgcatcaagccatcgacctgctgatgagccagctgcgcaagaccaagaccaactacgaa
ttcctggtccaggtctccaagaacaccccgggctccaacggcgctgacgagccgcagtac
agctag
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integrated database retrieval system
