Mycobacteroides chelonae: BB28_08755
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Entry
BB28_08755 CDS
T04665
Name
(GenBank) ribonuclease E
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
mche
Mycobacteroides chelonae
Pathway
mche03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mche00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BB28_08755
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mche03019
]
BB28_08755
03009 Ribosome biogenesis [BR:
mche03009
]
BB28_08755
Enzymes [BR:
mche01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
BB28_08755
Messenger RNA biogenesis [BR:
mche03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BB28_08755
Ribosome biogenesis [BR:
mche03009
]
Prokaryotic type
rRNA processing factors
BB28_08755
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
S1
PCB_OB
Motif
Other DBs
NCBI-ProteinID:
ANA97798
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All DBs
Position
1729277..1731952
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AA seq
891 aa
AA seq
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MLDALSKLDGRARSPHSNVDKQDAAKVREALAGEAEPTAAAEPVAPAETEAPAKAVAESP
AEDPDAPPTAPILVAEPTIIEAAAVPTPASAGPTAYDYGPLFVAPQAPEPQEDRPAPAVA
ASAEDVDEDSGDGDDPEAEAEGDGDRPANRRRRRGRRGRGRGRGEQAGGDGSDESSEDST
AEGGETADDEDAAENADGDNAAADGDESNAEDGDTPEGASRRRRRRRRRKAGSGDEGDSA
SEDDPPNTVVHERKPRAERGDEIQGISGSTRLEAKRQRRRDGRDAGRRRPPILTEAEFLA
RREAVDRVMVVRDKTRTESPHEGARYTQIAVLEDGVLVEHFVTSAASASLVGNIYLGVVQ
NVLPSMEAAFVDIGRGRNGVLYAGEVNWDAAGLGGSNRKIEQALKSGDYVLVQVSKDPVG
HKGARLTTQISLAGRYLVYVPGASSTGISRKLPDTERQRLKEILRDIVPSDAGVIIRTAS
EGVREEDIRADVQRLQEQWQGIEQSSTDLSAKASGAAVALYEEPDVLVKVVRDLFNEDFS
KLIIEGDAAWGTIDEYVKTVAPDLLSRINRYEPADGPDVFAVHRIDEQLAKALDRKVWLP
SGGTLVIDRTEAMTVVDVNTGKFTGAGGNLEETVTRNNLEAAEETVRQLRLRDVGGIVVI
DFIDMVLESNRDLVLRRLTEALGRDRTRHQVSEVTSLGLVQLTRKKLGTGLIEAFSSTCA
HCAGRGIVLHVDPVDNAGTAATGAKKPETGRRAKRSRKGKADEPEVVVARTPPHPQGEHP
MFKAMAAANGHHEDDEEGVSAEDEPDNDVIDEVDEIVEVVQSAPAPGDPETTPEDADGDV
AQDTEAEDVPEASSGDSEEPAAPEPEPAAKAPTRPRRRRSAARAAGPPVEH
NT seq
2676 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgacgcgttgtccaagctggacggtcgcgcccgcagcccccattccaacgtcgac
aagcaggacgccgcgaaggtgcgcgaggcgcttgccggcgaggcggaacccaccgctgct
gcggagcccgtggcaccggcagagaccgaggccccggcgaaggccgtcgccgaaagccct
gccgaggatcccgacgccccgccgaccgcgccgatccttgtcgcggaaccgaccatcatc
gaggccgcggcggtaccgacaccggcgagcgcgggacccaccgcatacgactacgggccg
cttttcgtggccccgcaggctcccgagccgcaggaggatcgccccgcgcccgccgtagcg
gcgagcgccgaggacgtcgatgaggactccggcgacggagacgatcccgaggccgaagcc
gagggcgacggtgaccgtccggccaaccggcgcaggcggcgggggcgtcgcgggcgcgga
cggggccgtggcgagcaggccggtggcgacggttccgacgaatcctcggaggactccaca
gccgagggcggcgagaccgccgatgacgaggacgctgccgagaacgctgatggtgacaac
gctgcggcagacggcgacgaatcgaatgccgaagatggcgacacgcccgagggcgccagc
cgtcgtcggcgccgccgccgccggcgcaaggccggaagtggtgacgagggtgacagcgcg
tcggaggacgatccgccgaacaccgtcgtgcatgagcgcaagccccgcgctgagcgaggc
gacgagattcagggtatttccgggtccacccgcctggaggccaagcgtcagcgccgccgc
gacgggcgtgatgccggacggcgccgcccaccgatcctgaccgaggcggagttcctggcc
cggcgtgaggccgtcgaccgggtgatggtggttcgggacaagacccgtaccgagtcgccg
cacgagggcgcccggtacacacagatcgcggtcctggaggacggtgtgctcgtcgagcac
ttcgtgacttcggccgcgtccgcctcgctggtgggcaacatctatctcggtgtggtgcag
aacgtgctgccctcgatggaggccgccttcgtcgacatcggccgtggtcgcaacggtgtg
ctgtacgccggtgaggtcaactgggacgctgccggtctgggcggttcgaaccgcaagatc
gaacaggcactcaagtcgggcgactatgtcttggtccaggtcagcaaggacccggtgggg
cacaagggcgcccgactgaccacccagatctcgctagcgggtcgctacctggtgtacgtg
ccgggtgcgtcctcgaccggaatcagccgcaagctcccggacaccgaacggcagcgtctc
aaggagatcctgcgcgatatcgtcccctcggatgccggcgtcatcattcggaccgcgtca
gaaggcgtgcgcgaagaggacattcgcgccgacgtgcagcggctgcaagaacagtggcag
ggcatcgagcagagctcgacggacctttccgctaaagcatccggtgctgccgtggcgctc
tacgaggagcccgatgtactggtcaaggtggtccgcgacctgttcaacgaggacttctcc
aagctcatcatcgaaggtgatgcggcgtggggcaccatcgatgaatacgtgaaaaccgtt
gctccagatcttctttcgcgtatcaatcgctatgagcccgccgacggtccggatgtcttc
gcggtgcaccgcatcgacgagcagctggccaaggcgctggaccgcaaggtgtggttgcct
tccggcggcacgctcgtcatcgaccgcactgaggccatgacggttgtcgacgtcaacacc
ggaaagttcaccggtgccggcggcaacctggaggagacggtcacccgcaacaacctggaa
gcggccgaggaaaccgttcggcaattgcgcctgcgcgacgtcggcgggatcgtcgtcatc
gacttcatcgacatggtgctcgaatcgaaccgggatctggtgcttcggcgtctgaccgag
gcgctgggccgcgatcgcacccgccaccaggtgtcggaagtgacatcgctgggcctggtg
cagctgactcgtaagaaactcggcacaggcctcatcgaggcgttctcgtcgacctgtgcg
cactgcgcggggcgcggcatcgtgctgcacgtcgacccggtcgataacgccggcaccgcg
gcgaccggcgccaagaagccggagacggggcggcgtgccaagcgttcccgcaagggcaag
gcagatgagcccgaagtagtggtcgcccgcaccccaccgcatccgcagggcgagcacccg
atgttcaaggcgatggcggcggcgaacggccaccacgaggacgacgaagagggcgtctcg
gcggaggacgagccggataacgacgtgatcgacgaggtcgacgagattgttgaggtcgtc
cagagcgcgccggctccgggcgacccggaaacgacgcccgaggacgctgacggtgacgtc
gcgcaggacaccgaggccgaagacgtgccagaggcttcttccggcgactcagaggagccc
gctgcgcccgaacccgagcccgccgcgaaggcacctaccaggccccgccgcaggcggtcc
gccgcacgcgcggccgggcctccggtcgagcactag
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