Mycobacteroides chelonae: BB28_13465
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Entry
BB28_13465 CDS
T04665
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
mche
Mycobacteroides chelonae
Pathway
mche03030
DNA replication
mche03430
Mismatch repair
mche03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mche00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BB28_13465
03430 Mismatch repair
BB28_13465
03440 Homologous recombination
BB28_13465
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mche03032
]
BB28_13465
03400 DNA repair and recombination proteins [BR:
mche03400
]
BB28_13465
Enzymes [BR:
mche01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BB28_13465
DNA replication proteins [BR:
mche03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BB28_13465
DNA repair and recombination proteins [BR:
mche03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BB28_13465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
Motif
Other DBs
NCBI-ProteinID:
ANA98664
LinkDB
All DBs
Position
complement(2673397..2676954)
Genome browser
AA seq
1185 aa
AA seq
DB search
MSSSNSSFVHLHNHTEYSMLDGAAKIKPMLAEVERLGMTAVGMTDHGNMYGASEFYNVAS
ATGVKPIIGIEAYIAPASRFDTKRVFWGDPGQKSDDVSGSGSYTHMTMVAENATGLRNLF
KLSSLASFEGQLGKWARMDAELIAEHASGIIATTGCPSGEVQTRLRLGQEAEALEAAAKW
QQIFGKENFFLELMDHGLSIERRVREGLLELGKKLGIPPLATNDCHYVTKDHSHNHEALL
CVQTGKTMSDPTRFKFDGDGYFLKPASEMRDLWDDAVPGACDNTLLIAERVQSYEDVWSF
KDRMPVFPVPEGEDQDSWLRKEVDRGLERRFDGVPGGVPEEYFTRAHYELDVIKQKGFPA
YFLVVGDLVTHAKEVGIRVGPGRGSAAGSLVAYALGITNIDPIPHGLLFERFLNPERPSA
PDIDIDFDDRRRGEMVRYATDKWGSDRVAQVITFGTIKTKAALKDSARIHYGQPGFAIAD
RITKALPPPIMAKDIPLSGITDPEHERYKEAAEVRTLIDTDPDVRTIYQTARGLEGLIRN
AGVHACAVIMSSEPLTDAIPLWRRAQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTVIGD
ALDNIKANRGIDLDLDHLPLEDPATYELLSRGDTLGVFQLDGGPMRDLLRRMQPTGFNDI
VAVLALYRPGPMGMNAHNDYADRKNGRQPIKPIHPELEEPLKDILSETYGLIVYQEQIMF
IAQKVASYSMGKADALRKAMGKKKLEVLEAEYKGFYEGMTNNGFSEKAVKALWDTILPFA
GYAFNKSHAAGYGLVSFWTAYLKANYPGEYMAGLLTSVGDDKDKAAVYLADCRRLGITVL
PPDVNESVHNFASVGEDIRYGLGGVRNVGANVVQSLIATRESKGAFTDFSDYLHKIDIAA
CNKKVTESLVKAGAFDSLGHSRKGLFLVQSDAVDSVLGTKKAEAMGQFDLFGGAGDDDAD
ASSVFAIKVPDEEWEEKHKLALEREMLGLYVSGHPLNGVAHLLGRQTDTQIPTILEGDIA
NDTQVRVGGILASVNRRVNKNGMPWASAQLEDLTGGIEVLFFPQAYSVYGAEIADDAVVL
VNAKVAIRDDRISLIANDLVVPDFSQASDDRPVAVTLPTRQCTIDKVTALKQVLARHPGT
NQVHLRLISGERVTTLELDQSLRVTPSSALMGDLKALLGPGCLGG
NT seq
3558 nt
NT seq
+upstream
nt +downstream
nt
gtgagctcctcgaattcttcgttcgtgcacctgcacaaccacaccgagtactcgatgctc
gatggtgcggcgaagatcaagccgatgcttgccgaggttgagcgcctcggcatgacggcg
gtcggcatgaccgaccacggcaacatgtacggcgccagcgagttttacaacgtcgccagc
gcgaccggggtcaagcccatcatcggcatcgaggcctacatcgcgccggcctctcggttc
gacaccaagcgtgtcttctggggcgatccggggcagaagtccgatgacgtgtccggttcg
ggttcctacacccacatgacgatggtcgccgagaacgcgacaggactgcgcaacctgttc
aagttgtcctcactggcctcattcgagggccagctgggtaaatgggcgcgcatggacgcc
gagctcattgccgagcacgccagcggcatcatcgccaccaccggatgtccttccggtgaa
gtgcagacccggctccgtctcggtcaggaggccgaggcactcgaagccgccgccaaatgg
cagcagatcttcggcaaggagaacttcttcctggagctgatggaccacgggctgtccatc
gaacgccgggtgcgcgagggactgctggagttgggcaagaagctcggcatacctccgctg
gccaccaacgactgccactacgtcaccaaggaccactcgcacaaccacgaagcactgctg
tgtgtgcagaccggcaagaccatgtcggaccccacgcgcttcaagttcgacggtgatggc
tacttcctgaagccggcgtccgagatgcgcgacctctgggatgacgccgtgcccggcgcg
tgtgacaacaccctgctcatcgccgagcgggtgcagtcgtacgaagacgtctggagcttc
aaggaccgcatgccggtgttcccggtgcccgagggtgaagaccaggactcctggctgcgc
aaggaggtggaccgtggactggagcgtcgcttcgacggcgtccccggcggggtacccgag
gagtacttcacccgtgcgcactacgagctggacgtcatcaagcagaagggtttccccgca
tacttcctggtcgtcggggacttggtcacccatgccaaggaagtcggaatcagggtgggc
ccgggccgtggatcggcggccggatcgctcgtcgcctacgcgcttgggatcaccaacatc
gaccccatcccacacgggctgctgttcgagcgcttcctgaatccggaacgaccgtcggca
cccgatatcgatatcgacttcgacgaccgtcgccgcggtgagatggttcggtacgccacg
gacaagtggggcagcgaccgggtcgcgcaggtcatcaccttcggcaccattaagaccaag
gcggcgctgaaggactccgcgcgtatccactacggccagcccggattcgccatcgccgac
cggatcaccaaggcgctgccaccgcccatcatggccaaggacattccgctttcgggtatc
accgaccccgaacacgagcggtacaaagaggccgccgaggttcgcaccctgatcgacacc
gatcccgatgtgcggaccatctatcagaccgcccgcggtctggaaggcctgatccgcaac
gccggtgtgcacgcctgtgccgtcatcatgagctcggagccactcaccgacgccattccg
ctgtggcggcgcgcgcaggacggcgccatcatcaccggctgggactatccttcgtgtgag
gccatcggcctgctgaagatggactttctggggttgcgcaacctgaccgtcatcggtgat
gcgctggacaacatcaaggccaacaggggcatcgatctggacctggatcatctgccgctg
gaagatccggccacgtacgaattgctctcccgcggtgacactctcggcgtgttccagctc
gacggcgggcccatgcgggatctgctgcgtcgtatgcagcccaccggattcaacgacatc
gtcgccgtgctggcgctgtaccgccccggcccgatgggcatgaacgcccacaacgactac
gccgaccgcaagaacggtcgccagcccatcaagccgattcaccccgagctggaggagccg
ctcaaggacatcctctcggagacctacggtctgatcgtctaccaagagcagatcatgttc
atcgcccagaaggtcgcctcgtactccatgggtaaggccgacgcgctccgtaaggccatg
ggcaagaagaagcttgaagtcctggaggccgagtacaagggcttctacgaggggatgacc
aacaacggcttctccgagaaggccgtcaaggcactgtgggacaccattcttccgttcgcc
ggatacgcgttcaacaagtcgcacgccgccggctacggattggtgtcgttctggaccgcc
tacctcaaggccaactaccccggcgagtacatggccgggctgcttacctccgtgggtgac
gacaaggacaaggcggccgtctacctcgccgattgccgtcgtctgggcatcacggtgttg
ccgccggacgtcaacgagtcggtccacaacttcgcctcggtgggggaggacatccgatac
gggctcggtggcgttcgaaatgtcggcgccaatgtggtgcagtccctgatcgcgacccgg
gaatcgaagggcgccttcaccgatttctcggactatctgcacaagatcgacatcgcggcc
tgcaataagaaggtcacggaatcgctggtgaaggccggagcctttgactcgctggggcat
tcccgcaaggggctttttctcgtccagtccgatgccgtcgactcggtgttgggcaccaag
aaagccgaagccatggggcagttcgacctcttcggcggtgccggcgatgacgacgccgac
gcatccagcgtgttcgccatcaaggtgcccgacgaggaatgggaagagaagcataagctc
gcgctcgagcgagagatgctggggctttatgtatccgggcacccgctcaacggggtggcg
cacctgctgggccgccagaccgacacccagattcccacgatcctcgaaggcgacatcgcc
aacgacactcaggtgcgcgtgggcggaatcctcgcctcggtcaaccgtcgggtcaacaag
aacggaatgccctgggcttccgcgcaactcgaggacctaaccggtggcatcgaggtgctc
ttcttcccgcaggcctattcggtgtacggtgccgagatcgccgatgacgcggtcgttctg
gtgaacgcgaaggtggcgatccgcgatgaccggatttcactgattgccaatgaccttgtg
gtgcccgacttctcgcaggcttccgatgatcgtccggttgcggtcacgctgccgacgcga
cagtgcaccatcgacaaggtgaccgcactcaagcaggtgctggcgcggcatcccgggacc
aaccaggtccatctgcggttgatcagcggagagcgtgtcaccactctcgaactcgatcag
tcgcttcgggtcacgccctcatcggctctgatgggtgacctcaaggcgctactcgggccc
ggctgcctgggcggctaa
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