Mycobacteroides chelonae: BB28_15130
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Entry
BB28_15130 CDS
T04665
Name
(GenBank) RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
mche
Mycobacteroides chelonae
Brite
KEGG Orthology (KO) [BR:
mche00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
BB28_15130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mche03021
]
BB28_15130
Transcription machinery [BR:
mche03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BB28_15130
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_20
FAM176
Motif
Other DBs
NCBI-ProteinID:
ANA98967
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All DBs
Position
3018275..3019693
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AA seq
472 aa
AA seq
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MLHAHARRRSSQERASVAATKAAAPETEAAKKAPVKAAVKAPAKKAPAKKAPAKAATKAP
AKKAAPAKKAAPAKKAAAKAVDPSLEPQGSPEDADIEPGEDLDPDLADDVDIEADLAEVA
ADPEPEAEAEAEGDEPSEKDKASGDFVWDEEESEALRQARKDAELTASADSVRAYLKQIG
KVALLNAEEEVELAKRIEAGLYATQIVTELTEKGEKLPAAQRRDMSWICRDGDRAKNHLL
EANLRLVVSLAKRYTGRGMAFLDLIQEGNLGLIRAVEKFDYTKGYKFSTYATWWIRQAIT
RAMADQARTIRIPVHMVEVINKLGRIQRELLQDLGREPTPEELAKEMDITPEKVLEIQQY
AREPISLDQTIGDEGDSQLGDFIEDSEAVVAVDAVSFTLLQDQLQSVLETLSEREAGVVR
LRFGLTDGQPRTLDEIGQVYGVTRERIRQIESKTMSKLRHPSRSQVLRDYLD
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
attttgcatgcccatgctcgtcgacgaagcagccaggaaagggcgtcagtggcagccacg
aaagcagcagctccggaaaccgaagcggccaagaaggcaccggtgaaggctgccgtcaag
gcaccggccaagaaggcaccggccaagaaggcgcccgcgaaggctgcgaccaaggccccc
gccaagaaggccgcgcccgcgaagaaggcagcacccgccaagaaggccgcggccaaggca
gtcgatccctccctcgagccgcagggcagccccgaggacgccgacatcgagcccggcgag
gatctggaccccgacctcgccgacgacgtggacatcgaggcggacctcgccgaggttgcc
gccgatcccgagcccgaggctgaggctgaggccgaaggtgacgagccctccgagaaggac
aaggcctcaggcgatttcgtctgggacgaggaagaatccgaggcgctgcgccaggcccgt
aaggacgccgagctcaccgcttctgcggactcggtgcgcgcctacctcaagcagatcggc
aaggtggccctgctcaacgccgaagaggaagttgagctggccaagcggatcgaggcaggc
ctttacgccacccagatcgtcaccgagctgaccgaaaagggcgagaagcttccggccgca
cagcgccgtgacatgtcctggatctgccgtgacggcgatcgcgccaagaaccatctgctg
gaggccaacctgcgcctggtggtttcgctggccaagcgctacaccggtcgcggcatggcg
ttcctggacctcatccaggaaggcaacctgggtctgatccgcgcggtcgagaagttcgac
tacacaaagggttacaagttctcgacgtacgcgacctggtggatccgtcaggccatcacc
cgcgcgatggccgaccaggcccgcaccatccgtatcccggtgcacatggtcgaggtcatc
aacaagctcggccgcattcagcgtgagctgctccaggacctgggccgcgagcccacaccc
gaagagctggccaaggaaatggacatcacgcccgagaaggtgctggagatccagcagtac
gcgcgtgagcccatctcgctggaccagaccatcggcgacgagggcgactcgcagctcggc
gacttcatcgaggattccgaagccgtggtcgcggtggacgcggtgtccttcaccctgctg
caggatcagctgcagtcggtgctggagacgctttccgaacgtgaggccggcgtggtgcgt
ctgcggttcggtctcaccgacggccagccgcgcacgctcgacgagatcggtcaggtgtac
ggggtgacccgtgagcgcatccggcagattgagtccaagaccatgtcgaagctgcgccac
ccgagccgttcacaggtgctgcgcgactacctggactag
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