KEGG   Mycobacteroides chelonae: BB28_15610
Entry
BB28_15610        CDS       T04665                                 
Name
(GenBank) ribonuclease J
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
mche  Mycobacteroides chelonae
Pathway
mche03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mche00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BB28_15610
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mche03019]
    BB28_15610
Messenger RNA biogenesis [BR:mche03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     BB28_15610
SSDB
Motif
Pfam: RNase_J_b_CASP RNase_J_C RMMBL Lactamase_B_2 Lactamase_B Anti-Pycsar_Apyc1
Other DBs
NCBI-ProteinID: ANA99057
LinkDB
Position
complement(3098391..3100082)
AA seq 563 aa
MPITPPEDLRAPGPLADGALRVTALGGISEIGRNMTVFELRGRLLIIDCGVLFPGHDEPG
VDLILPDIRHIEDRLDDVEALVLTHAHEDHIGAIPFLLKMRPDIPVVGSAFTLALVEAKC
REHRITPRFIKVAEGERSTHGAFECEYFAVNHSIPDALAIAVHTEAGTILHTGDIKLDPL
PPDRRPTDLPGLSGLGDRGVDLFLVDSTNSEVPGVGPSESEIAPTLNRLIETARGRVIIA
CFASNVARVQQIIDASVAHGRRVALVGRSMVRNMGIARDLGFLDVEDRDLINVEAANELA
PQRVVMVTTGTQGEPMAALSRMARGDHRQITLTPDDLVILSSSLVPGNEEAVYGIIDSLA
KVGTRVVTNTHARVHVSGHAYAGELLYLYNAVRPRNVMPVHGTWRHLRANAELAVKTGVD
EDRIVLAENGVSVDLHNERARIAGRIPVGKMFVHGLVDGDVSDATVGERLVLSNGGFIAV
TVVVRSNGRLVGRPELFSRGFSDDAKALDPVTEMVITELNSLAEQSVTDTGRIAQSVRRV
VGKWVGETYRRQPMIVPTVLTVD
NT seq 1692 nt   +upstreamnt  +downstreamnt
gtgccgataacgccacccgaagatctgcgtgcgcccggtccgctcgccgatggcgcattg
cgcgtcaccgcgctcggcggtatcagcgagatcggccgcaatatgacggttttcgagctg
cgtgggcgcctcctcatcatcgactgtggagtgcttttccccggccatgacgagcccggc
gtggacctgatccttccggacatccggcatatcgaagatcgtctcgatgatgtcgaggcg
ctggtcttgacccatgcgcacgaggatcacatcggagccatccctttcctgctcaagatg
cgccccgatatcccagtggtgggttcggctttcacgctcgcgttggtcgaggccaagtgc
cgcgagcaccgcatcacccctcggtttatcaaggtggcggagggcgagcggtccactcac
ggcgcctttgaatgcgagtacttcgcggtcaaccactcgattcccgacgcactcgccatc
gccgtacacaccgaggccgggaccatcttgcacaccggcgatatcaagcttgatccgctg
cctccggaccgccgtcccaccgacctgcccgggctatccggattgggtgatcggggtgtc
gacctgttcctcgtcgactccacgaactccgaggtgccgggagtaggtccatcggagagc
gagatcgctcccaccctgaaccggctcatcgagaccgcgcgcggccgggtgatcattgcg
tgtttcgccagcaatgtggcacgggtgcaacagatcatcgatgcctcggtggcgcacgga
cgccgtgtcgcgctcgtgggccgatcgatggtgcgcaacatgggtatcgcccgcgatctg
ggctttctcgacgtcgaggaccgcgacctgattaatgtagaggccgcgaacgagcttgca
ccgcaacgcgttgtgatggttaccaccggcacacagggtgagccgatggctgcgctctca
cgtatggctcgtggcgatcatcgccaaatcaccctgactcctgacgatttggtcatcttg
tcgtcatcgctggtgccgggcaatgaggaagccgtctacggcatcattgactcgcttgcg
aaggtgggcactcgggttgtgacaaacacccatgcgcgggtgcatgtttcgggacatgcc
tatgccggggagctgctctacctctacaacgcggtacgcccgcgcaatgtcatgccggtg
cacggcacctggcggcatctgcgtgccaatgccgaacttgcggtcaagaccggtgtcgat
gaagaccggatcgtgttggcggaaaacggcgtaagcgtcgacctgcacaacgagcgggcg
cgcattgcgggacggattccggtgggcaagatgtttgtccacggcctggtcgatggtgac
gtgtcagatgccaccgtcggcgagcgcctggttttgagcaatggcggattcatcgcggtc
actgtcgtggtgcgtagcaacgggcgcctggtcggcaggccggagctgttctcgcgcgga
ttctccgatgacgccaaggccctggacccggtgaccgagatggtgatcaccgagttgaat
tcacttgccgaacagtcggtcaccgataccggccgcatcgcgcagtcggtgcggcgtgtg
gttggcaaatgggtcggcgagacctaccgccgccagcccatgatcgtaccgaccgtgttg
acggtcgactaa

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