Mycobacteroides chelonae: BB28_19315
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Entry
BB28_19315 CDS
T04665
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
mche
Mycobacteroides chelonae
Pathway
mche03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mche00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BB28_19315
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mche03021
]
BB28_19315
03400 DNA repair and recombination proteins [BR:
mche03400
]
BB28_19315
Enzymes [BR:
mche01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BB28_19315
Transcription machinery [BR:
mche03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BB28_19315
DNA repair and recombination proteins [BR:
mche03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BB28_19315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
ANA99742
LinkDB
All DBs
Position
complement(3874421..3875473)
Genome browser
AA seq
350 aa
AA seq
DB search
MLISQRPTLSEESLAENRSRFVIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRIDGVL
HEFTTVPGVKEDVTDIILNLKSLVVSSEEDEPVTMYLRKQGPGAVTAGDIVPPAGVTVHN
PDMHIATLNDKGKLEIELVVERGRGYVPAVQNKASGAEIGRIPVDSIYSPVLKVTYNVDA
TRVEQRTDFDKLVLDVETKNSITPRDALASAGKTLVELFGLARELNVEAEGIEIGPSPAE
ADHIASFALPIEDLDLTVRSYNCLKREGVHTVGELVARTESDLLDIRNFGQKSIDEVKIK
LHQLGLSLKDSPTSFDPSEVAGYDVATGTWSDTGSYDFDGDQDFAETEQL
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgctgatttctcagcgacccaccctgtccgaagaatcgctggccgagaaccggtcgcgc
ttcgtcatcgagcccctggagccgggattcggctacaccctgggcaactcgctgcggcgc
accctgctgtcgtccatcccgggcgcggccgtcaccagcatccgcatcgacggtgtgctg
cacgagttcaccaccgttcccggggtgaaggaagacgtcaccgacatcatcctgaacctc
aagagcctcgtggtgtcctcggaggaggacgagccggtcaccatgtacctgcgcaagcag
ggaccgggtgccgtcaccgccggtgacatcgttccgcccgccggcgtgaccgtgcacaac
cccgacatgcacatcgcgaccctgaacgacaagggcaagctggagatcgagctcgtcgtc
gagcgcggtcgcggctacgtcccggccgtgcagaacaaggcctcgggtgccgagatcggt
cgtatccccgtcgattccatctactcgccggtgctcaaggtcacgtacaacgtcgacgcc
acccgtgtcgagcagcgcaccgacttcgacaagctggtgctggatgtcgagaccaagaac
tcgatcaccccgcgtgacgccctggcctcggctggcaagacgctggttgagctgttcggt
ctggcacgtgaactcaacgtcgaggccgagggcatcgagatcgggccgtcgccggccgag
gcagaccacatcgcctcgttcgcgctgcccatcgaggacctggacctgaccgtccggtcg
tacaactgcctcaagcgcgagggtgtgcacaccgtcggcgagctggttgcccgcaccgag
tcggatctgctggacatccgcaacttcggtcagaagtccatcgacgaggtgaagatcaag
ctgcatcagctcggcctgtcactcaaggacagcccgaccagcttcgatccgtccgaggtc
gccggatacgacgttgccaccggcacatggtcggacaccggctcgtacgacttcgatggc
gatcaggacttcgccgaaaccgaacagctctaa
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