Mycobacterium intracellulare subsp. chimaera: AN480_07525
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Entry
AN480_07525 CDS
T04926
Name
(GenBank) ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
mchi
Mycobacterium intracellulare subsp. chimaera
Pathway
mchi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mchi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AN480_07525
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mchi03019
]
AN480_07525
03009 Ribosome biogenesis [BR:
mchi03009
]
AN480_07525
Enzymes [BR:
mchi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AN480_07525
Messenger RNA biogenesis [BR:
mchi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AN480_07525
Ribosome biogenesis [BR:
mchi03009
]
Prokaryotic type
rRNA helicases
AN480_07525
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
HEM4
UvrA_inter
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
AOS91340
UniProt:
A0A220Y9B8
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All DBs
Position
1573712..1575415
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AA seq
567 aa
AA seq
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MTLSDSSTGAASTTFADLQIHPSVLRAVADVGYESPTGIQAATIPALMAGSDVVGLAQTG
TGKTAAFAIPILSKIDVTSTATQALVLAPTRELALQVAEAFSRYGAHLPKINVLPIYGGS
SYGVQLAGLRRGAHVVVGTPGRVIDHLERGTLDLSHVDYLVLDEADEMLTMGFAEEVDRI
LSETPEYKQVALFSATMPPAIRKLTTKYLHDPLEVSTKAKTATAENISQRYIQVAGPRKM
DALTRVLEVEPFEAMIVFVRTKQATEEVAEKLRARGFSAAAINGDIPQGQRERTVAALKD
GSIDILVATDVAARGLDVERISHVLNYDIPHDTESYVHRIGRTGRAGRSGTALLFVSPRE
RHLLKAIEKATRQTLTETALPTVEDVNAQRVAKFADSITTALGAPGIDLFRKLVQDYERE
HDTPMADIAAALALQSRDGEEFLMAPEPPPERRERRTERRDRPEKPRSTRPFATYRIAVG
KRHKIGPGAIVGAIANEGGLHRSDFGHIAIGPDFSLVELPAKLPKSTFKRLEQTRISGVL
INLQPDRSSAKARGGRDGGKPRRKHGE
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atgaccctctcagacagctcgaccggggctgcctctacgacgtttgccgacctgcagatc
cacccctcggtgctgcgggcggttgccgacgtcggctacgaatcacccaccggcatccag
gccgcgacgatcccggcgctgatggcgggctccgacgtggtcgggctggcgcagaccgga
accggcaagaccgccgcgttcgccatccccatcctttccaagatcgacgtcaccagcacc
gccacccaagccctggtgctcgctccgacccgggaactggccctgcaggtcgccgaggcg
ttcagccggtacggtgcccacctgcccaagatcaacgtgctgccgatctacggcggctcg
tcctacggcgtgcagttggccgggctgcggcgcggggcgcacgtggtggtcggcacgccc
ggccgggtgatcgaccacctcgaacgggggacgctggacctgtcccacgtcgactacctg
gtgctcgacgaggccgacgagatgctcaccatgggcttcgccgaagaggtcgatcgcatc
ctgtcggagaccccggaatacaagcaggtggcactgttctccgcgacgatgccgcccgcg
atccgcaagctcaccaccaagtacctgcacgacccgctcgaggtcagtaccaaggcgaaa
accgcgaccgccgagaacatttcgcagcgctacatccaggtcgccggtccccgcaagatg
gacgcgctgacccgggtcctcgaggtcgagccgttcgaggcgatgatcgtcttcgtcaga
accaaacaggccaccgaggaagtcgccgaaaagctaagggcgcgaggtttctccgccgcg
gccatcaacggggacatcccgcagggccagcgcgagcggaccgtcgccgccttgaaggac
ggcagcatcgacatcctggtcgccaccgacgtggccgcgcgcggactcgacgtggagcgg
atctcgcacgtgctcaactacgacatcccgcatgacaccgagtcgtacgtgcaccggatc
gggcgcaccggcagggccggacgttcgggcaccgcgctgctcttcgtgtcgccgcgagag
cgccacctgctcaaggcgatcgaaaaggccacgcggcaaacgctcaccgaaaccgccttg
cccaccgtcgaggacgtcaacgcgcaacgggtggccaagttcgccgattcgatcaccacc
gcgctcggggcccccggcatcgacctgttccgcaagctggtccaggactacgaacgcgag
cacgacaccccgatggccgatatcgccgccgcgctggccctgcaatcccgcgacggcgag
gaattcctgatggcgcccgaacctccgcccgagcgtcgcgagcggcgcaccgaacgccgc
gatcgccccgaaaagccaaggtctacacggccgttcgccacctatcgcatcgcggtgggc
aagcgccacaagatcggtccgggcgccatcgtgggcgccatcgccaacgagggagggctg
catcgcagcgacttcggccacatcgcgatcggcccggacttctcgttggtggaactgccg
gccaagttgcccaagtcgacgttcaaaaggcttgagcagacccgcatctcgggggtgttg
atcaaccttcagccggacaggtcctccgccaaggcccgcggcggccgggacggcgggaaa
ccgcgcaggaaacacggcgaatga
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