Mycobacterium intracellulare subsp. chimaera: AN480_12150
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Entry
AN480_12150 CDS
T04926
Name
(GenBank) DEAD/DEAH box helicase
KO
K03727
ATP-dependent RNA helicase HelY [EC:
5.6.2.6
]
Organism
mchi
Mycobacterium intracellulare subsp. chimaera
Brite
KEGG Orthology (KO) [BR:
mchi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mchi03019
]
AN480_12150
Enzymes [BR:
mchi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
AN480_12150
Messenger RNA biogenesis [BR:
mchi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
AN480_12150
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
SH3_HelY
DEAD
ResIII
Helicase_C
DEXQc_Suv3
HVO_A0261_N
MTR4-like_stalk
AAA_22
Motif
Other DBs
NCBI-ProteinID:
APD84107
LinkDB
All DBs
Position
2669298..2672078
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AA seq
926 aa
AA seq
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MAELVELTRFATDLPFALDGFQHRACAALERGHGVLVCAPTGAGKTVVGEFAVHLALAAG
GKCFYTTPLKALSNQKHTDLTARYGRDRIGLLTGDMSVNADAPVVVMTTEVLRNMLYADS
PALQGLSYVVMDEVHFLADRMRGPVWEEVILHLPDEVRVVSLSATVSNAEEFGGWIQTVR
GDTTVVVDEHRPVPLWQHVLVGKRLFDLFDYRHSDAPEQPGAPREPRVNPDLLRHITHRR
EADRMSDWQPRRSAGRGRPPARSGRPRLYRTPARPDVIASLDAEGLLPAITFVFSRAGCD
AAVQQCLRSPLQLTTQEERAQIAEVIEHRCGDLADADLAVLGYYEWREGLLRGLAAHHAG
MLPAFRHTVEELFTAGLVRAVFATETLALGINMPARTVVLERLVKFNGEQHVALTPGEYT
QLTGRAGRRGIDVEGHAVVLWNPTEETTEPSAVAGLASTRTFPLRSSFAPSYNMTINLVQ
QMGPEQAHRLLEQSFAQYQADRSVVGLVRGIERGDAMLGEIGGELGGPKAPILEYARMRA
RISEMERAQSRASRLQRRQAATDALAALRRGDIINIAHGRRGGLAVVLESARDSSDPRPL
VLTENRWAGRISSADYSGMSAPVGSMPLPKRVEHRQPRVRRDLASALRSAAAGLAMPAKR
RGRGDADAEFHDPELASLREQLRRHPSHNTPGREEQVRQAERYLRIERDNAQLEKKVAAA
TNSLARTFDRIVGLLTERGFIEGGDGDPRVTDDGRLLARIYSESDLLVAECLRTGAWSGL
KPAELAAVVSSVLYESRGGDGPGAAFAADAPTQPLRQALQQTSRLSMALRADEQTHRIAP
SREPDDGFVNTIYRWARTGDLAAALAAADPAGSGSPLLAGDFVRWCRQALDLLDQVRNAA
PDAEVRATAKRAINDIRRGVVAVDAG
NT seq
2781 nt
NT seq
+upstream
nt +downstream
nt
gtggcggagctggtcgaactcacccgattcgccacggatctgcccttcgcgctcgacggc
tttcagcatcgggcgtgtgcggcgctcgaacgcggccacggcgtgctggtctgcgcgccg
accggcgccggcaagaccgtcgtcggggaatttgcggtacacctggcgctggcggccggc
ggcaagtgcttctacaccacgccgctcaaagcgctgagcaaccagaagcacaccgacctg
acggcgcgctacggccgcgaccgcatcggcctgctcaccggggacatgtcggtaaacgcc
gatgcgcccgtcgtggtcatgacgaccgaggtgctgcgcaacatgctttacgcggattcg
cctgcgctgcagggcctttcctacgtggtaatggacgaagtgcacttcctggccgaccgg
atgcggggcccggtgtgggaagaggtgatcctgcacctgccggacgaagtccgcgtggtc
agcctgtcggcgacggtgagcaacgccgaggagttcggcggctggatccagaccgtgcgc
ggcgatacgacggtcgtcgtcgacgaacaccggccggtgccgctttggcaacacgtgttg
gtgggcaagcgacttttcgacctcttcgattaccggcattcagacgcccccgagcagccg
ggcgccccgcgcgagccccgcgtcaacccggatctgttgcggcacatcacccatcgccgt
gaggcggatcggatgtcggattggcagccgcggcgaagtgccggacgcgggcgtccgccg
gcgcggtcgggccggccccggctctaccgcacgccggcgcgtccggacgtgatcgcgagc
ctggatgccgaagggctgctgccggcaatcacgttcgtgttctcgcgggccggctgtgac
gccgccgtccagcaatgcctgcgttcgcccctgcagctgaccactcaggaagagcgggcg
cagatcgcggaggtgatcgagcatcgctgcggcgatctcgccgacgccgacctcgccgtg
ctcggctactacgagtggcgcgaggggctgctgcgcggtctggccgcccaccacgccggc
atgttgcccgccttccggcacacggtcgaagagctgttcaccgccgggctggtgcgggcc
gtgttcgccaccgagacgttggcgctggggatcaacatgcccgcccgcaccgtggtgctc
gagcggctggtcaagttcaacggcgagcagcacgtggcgctgacgccgggggagtacacc
cagttgaccgggcgcgccggccggcgcggcatcgatgtcgagggccacgcggtggtgctc
tggaatcccaccgaagaaaccaccgaaccctccgcggtggccgggctggcctccacccgc
accttcccgctgcgcagttcgttcgccccgtcctacaacatgacgatcaacctcgtgcag
cagatgggccccgagcaggcacatcggttgctggagcagtcatttgcgcagtatcaggcc
gaccgttccgtcgtcgggctggtgcgcggcatcgagcggggcgacgcgatgctgggcgag
atcggcggcgagctggggggccccaaggcgccgatcctcgagtacgcccggatgcgcgcg
cgcatctccgagatggagcgcgcccagtcgcgtgcctcgcgactgcaacgccggcaggcg
gccaccgacgcgctggccgcgctgcgccggggcgacatcatcaacatcgcccacggccgg
cgcggtgggctggccgtggtgctggaatccgcccgcgacagctccgacccgcggccgctg
gtgctgaccgaaaaccgttgggcgggaaggatttcctcggccgactattcgggcatgtcc
gcgccggtcgggtcgatgcccctgccgaagcgggtcgagcatcgccagccgcgcgtccgc
cgcgatctggcgtcggcgctgcggtcggccgccgccgggctggccatgccggcgaagcgc
cgcggccgcggggacgccgacgctgaatttcatgaccccgagctggcgtcgctgcgcgaa
cagctgcgccggcacccgtcgcacaacacgcccggccgggaagaacaggtccgccaggcc
gagcgctacctgcggatcgaacgcgacaacgcgcaattggagaaaaaggttgcggcagcg
accaattcgctggcacggaccttcgatcggatcgtcgggctgctcaccgagcgtggcttc
atcgaaggcggcgacggcgatccccgggtcaccgacgacgggcgactgctggcgcgcatc
tacagcgaaagcgatctgctggtcgccgaatgcctgcgcaccggcgcgtggtccggtttg
aagcccgccgagctggcggcggtggtctcgtcggtgctgtacgagagccggggcggggac
gggccgggcgcggcgtttgccgccgacgcccccacgcagccactacgccaggcgttgcag
cagacgtcgcggctgtcgatggcgttgcgcgccgacgagcagacgcaccggatcgccccg
agccgcgaacccgacgacggcttcgtcaacaccatctaccgttgggcccggaccggtgat
ctggccgcggcgctggcggcggccgacccggcgggcagcggctcgcccctgctggcgggc
gatttcgtgcgctggtgccggcaggcgcttgacctgctggaccaggtgcgcaacgccgcc
ccggacgccgaggttcgggccaccgcgaagcgggccatcaacgacattcggcgcggcgtc
gttgcagttgacgccgggtag
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