Mycobacterium intracellulare subsp. chimaera: AN480_18195
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Entry
AN480_18195 CDS
T04926
Name
(GenBank) RNA polymerase subunit sigma
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
mchi
Mycobacterium intracellulare subsp. chimaera
Brite
KEGG Orthology (KO) [BR:
mchi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mchi03021
]
AN480_18195
Transcription machinery [BR:
mchi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AN480_18195
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
AOS92946
UniProt:
A0A220YFJ1
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All DBs
Position
4065081..4066040
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AA seq
319 aa
AA seq
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MANASTSRFDGDLDAQSPAADLVRVYLNGIGKTALLNAAGEVELAKRIEAGLYAEHLLET
RKRLGENRKRDLEAVVRDGKAARRHLLEANLRLVVSLAKRYTGRGMPLLDLIQEGNLGLI
RAMEKFDYTKGFKFSTYATWWIRQAITRGMADQSRTIRLPVHLVEQVNKLARIKREMHQN
LGREATDEELAAESGIPVDKINDLLEHSRDPVSLDMPVGSEEEAPLGDFIEDAEAMSAEN
AVIAELLHTDIRSVLATLDEREHQVIRLRFGLDDGQPRTLDQIGKLFGLSRERVRQIERD
VMSKLRNGERADRLRSYAS
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacgccagcacgagcagatttgacggcgatctggatgctcaaagccccgcggcg
gatctagtgcgcgtatatctgaacggaatcggcaagacggcgttgctcaatgcggcgggg
gaagttgaactcgcgaagcggatcgaagccgggctctacgccgagcacctgctcgaaacg
cgtaagcgcctcggggagaaccgtaaacgcgatctagaggccgtggtgcgcgatggtaag
gccgcgcgccgtcacctgctggaggcgaacctgcgcctggtggtgtcgctggccaagcgg
tacacgggtcgtggcatgccgctgctggacctgatccaggagggcaacctcgggctgatc
cgcgcgatggaaaagttcgactacacaaagggattcaagttctcgacctacgccacgtgg
tggattcgtcaggccatcacccgcggcatggccgaccagagccgcaccatccggctgccc
gtccacctggtcgagcaggtcaacaagctggcgcggatcaagcgtgagatgcaccagaac
ctcggccgcgaggccaccgacgaggaactggccgccgaatccggcatcccggtcgacaag
atcaacgacctgctcgagcacagccgcgacccggtgagcctggacatgccggtcggctcc
gaggaggaagccccgctgggcgacttcatcgaggacgccgaggcgatgtcggccgagaac
gcggtgatcgccgagttgctgcacaccgacatccgcagcgtgctggccacgctcgacgag
cgcgagcaccaggtgatccggttgcggttcggcctcgacgacggccagccccgcacgctg
gaccagatcggcaagctgttcgggctgtcccgcgagcgggttcgccaaatcgagcgggac
gtaatgtccaaactccgcaacggggagcgcgccgacaggctacggtcgtacgcgagctga
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