Mycobacterium intracellulare subsp. chimaera: AN480_22410
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Entry
AN480_22410 CDS
T04926
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
mchi
Mycobacterium intracellulare subsp. chimaera
Pathway
mchi03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mchi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AN480_22410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mchi03021
]
AN480_22410
03400 DNA repair and recombination proteins [BR:
mchi03400
]
AN480_22410
Enzymes [BR:
mchi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AN480_22410
Transcription machinery [BR:
mchi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AN480_22410
DNA repair and recombination proteins [BR:
mchi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AN480_22410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
AOS93597
UniProt:
A0A220YHZ1
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All DBs
Position
complement(4941134..4942177)
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AA seq
347 aa
AA seq
DB search
MLISQRPTLSEEVLTDNRSQFVIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRIDGVL
HEFTTVPGVKEDVTAIILNLKSLVVSSEEDEPVTMYLRKQGPGEVTAGDIVPPAGVTVHN
PDLHIATLNDKGKLEVELVVERGRGYVPAVQNRASGAEIGRIPVDSIYSPVLKVTYKVDA
TRVEQRTDFDKLILDVETKSSINPRDALASAGKTLVELFGLARELNVEAEGIEIGPSPAE
ADHIASFALPIDDLDLTVRSYNCLKREGVHTVGELVSRTESDLLDIRNFGQKSIDEVKVK
LHQLGLSLKDSPASFDPSQVAGYDVATGTWSTEAAYDDQDYAETEQL
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgctgatctctcagcgacccacactgtcggaggaagtcctcaccgacaaccgctcccag
ttcgtcatcgagccgctggagcccggattcggttacaccctgggcaattcgctgcgccgg
acgctgctgtcctcgattccgggtgcggccgtcaccagcatccgcattgacggcgtgctg
cacgagttcaccaccgtgcccggcgtcaaggaagacgtcaccgcgatcatcctgaacctc
aagagcctggtggtgtcctccgaggaggacgagcccgtcacgatgtacctgcgcaagcag
ggtccgggcgaggtcaccgcgggcgatatcgtgccccccgccggtgtcacggtgcacaac
cccgacctgcacatcgcgacgctgaacgacaagggcaagctcgaggtcgagctggtcgtc
gagcggggccgtggctacgtgccggccgttcagaaccgggcttcaggcgccgaaatcggc
cgcatcccagtcgattccatctactcgccggtgctcaaggtcacctacaaggtggacgcc
acccgtgtcgagcagcgcaccgacttcgacaagctgatcctcgatgtcgagaccaagagt
tcgatcaacccccgcgatgcgctggcgtccgcgggcaagaccctggtcgaattgttcggt
ctggcacgcgaactcaacgtcgaggccgagggcatcgagatcgggccgtcgccggcggag
gccgaccacatcgcgtcgttcgcgctgccgatcgacgacctggacctgacggtgcggtcc
tacaactgcctcaagcgcgagggcgtgcacaccgtcggcgagctggtgtcgcgcaccgag
tccgacctgctggacatccgcaacttcggtcagaagtccatcgacgaggtgaaggtcaag
ctgcaccagctgggcctgtcgctcaaggacagcccggcgagcttcgacccctcgcaggtc
gcgggctacgacgtcgccaccggcacctggtccaccgaggccgcctacgacgaccaggac
tacgcggaaaccgaacagctctaa
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