Mycobacterium intracellulare subsp. chimaera: AN480_23100
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Entry
AN480_23100 CDS
T04926
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
mchi
Mycobacterium intracellulare subsp. chimaera
Pathway
mchi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mchi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AN480_23100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mchi03400
]
AN480_23100
Enzymes [BR:
mchi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
AN480_23100
DNA repair and recombination proteins [BR:
mchi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AN480_23100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
PDDEXK_1
AAA_30
UvrD_C_2
Motif
Other DBs
NCBI-ProteinID:
AOS93703
LinkDB
All DBs
Position
5069692..5072994
Genome browser
AA seq
1100 aa
AA seq
DB search
MQRFDLLGPLPAERSTTVLEASAGTGKTFALAGLVTRYLADGAASLDQMLLITFGRAASQ
ELRERVRCQIVAAVRAFADPSTVGDNQLVAYLLDGTDDQRAARRQRLRDALAGFDAATIA
TTHQFCQLVLRSLGVAGDTAASVTLLDSLDDLVTEIVDDLYLAHFGQERDDPALHYSEAL
RLAREVVNNPSTQLRPRDPDPDSRAAVCLRFANDVLAELDTRKRRLGVLGYDDLLTRLAD
ALATDGSPARLRMHQRWPIVMVDEFQDTDPVQWQVIDRAFSGRSTVILIGDPKQAIYAFR
GGDIVTYLRAAQTAGERKTLDINWRSDSALVARLQVVLRGAQLGDPAIVVNDVGAHHRGH
RLAGAPRNDPFRLRVVSRKTLGRRGIQNLPIDELREHIGADLAADIRALLAAGATFDGEP
LQARDIAVIVERHRDAHACFKALCDAGVPAVYTGNTDVFTSEAAEDWLCLLEAFDQPHRP
GMVRAAAATMFFGETAQTLAAGGDALTDRIAKTLREWAGHARERGVAAIFEAAQLLGMRD
RVLGWRGGERHMTDLAHVTQLLQEVAHREHYGLPALRDWLRRQRDERGGAPERNRRLDSD
AAAVQIMTVFVSKGLQYPIVYLPFAFNRNTQDSDVVLFHDEDGTRCLHVGGKDSPDFKTV
ERLGRKEDASDDSRLTYVALTRAQAQVVAWWSPAYFEPNGGLSRLLRGRRPGDPVVPDRC
EPAKVSDDDALARLREWEAAGGPVIEDSVVAPAPSLPPAPVPRHLDSRHFHRAIDTTWRR
TSYSGLIRVAQASGVGSEPDVAGLDDEVGDIPLSSPAAGPDVPSPMADLPAGATFGSLVH
AVLETADPFAADLTAELEEHIREHSAWWPVAATPEELAAAMVPMHDTPLGPLAGGLTLRR
IGLSDRLRELDFELPLAGGDRPSVGPEARLADLAPLLREHLPHDDPLVSYADRLTDRALG
DQSLRGYLTGSIDAVLRIPDGAGHRFVVVDYKTNRLGDPERPLTAADYDRPQMAEAMLHS
DYPLQALLYCAVLHRFLRWRIRDYDPDRHLGGVLYLFVRGMCGADTPVRDGHPCGVFSWR
PPPSLITALSDLLDARTVPA
NT seq
3303 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgcttcgacctgttgggcccgttgccggccgagcgctcaaccaccgtgctggag
gccagcgcgggcaccggcaagacgttcgcgttggcgggcctggtgacgcgctatctcgcc
gacggcgcggcgagcctcgatcagatgctgctcatcacgttcggccgcgccgccagccag
gaactgcgggaacgtgtccgctgccaaatcgtcgccgcggtaagggctttcgccgacccg
tcgacggtcggcgacaaccagctggtggcgtacctgctggacggcacggacgatcagcgc
gcggcgcgccgacagcgtctccgcgacgcgctggccggcttcgacgcggcgaccatcgcc
accacccaccagttctgccagctggtgctgcgctcgctcggcgtggccggcgacaccgcc
gccagcgtgaccctgctcgacagcctcgacgacctggtgaccgagatcgtcgacgacctc
tacctggcgcacttcgggcaggagcgcgacgacccggcgctgcactactccgaggcgctg
cggctggcccgcgaggtggtcaacaacccgtcgacccagctgcggccgcgcgacccggac
cccgattcgcgggccgccgtctgcctccggttcgccaatgacgttctggccgagcttgat
acgcgcaagcgccggctgggagtcctcggctacgacgacctgctgacccgactggccgac
gcgctggccaccgacggctcccccgcccggctgcggatgcaccagcgttggccgatcgtc
atggtcgacgagttccaggacaccgacccggtgcaatggcaggtcatcgaccgcgcgttc
agcgggcgctccacggtgatcctgatcggcgaccccaaacaggcgatctatgcgtttcgc
gggggcgacatcgtgacctacctgcgggcggcccagacggcgggtgagcgcaagacgctg
gacatcaactggcgcagcgattccgcgctcgtggcgcggctgcaggtggtgctgcgcggc
gcccagctcggtgaccccgcgatcgtggtgaacgatgtcggcgcgcatcaccgcggccac
cggctcgccggcgcgccccgcaacgacccgttccggttgcgcgtcgtgtcgcgaaaaaca
ctgggacgccgcggcattcaaaacctgcccatcgacgaactgcgcgagcacatcggcgcc
gacctcgccgccgacatccgcgccctgctcgccgccggcgccacgttcgacggcgagccc
ctgcaggcccgcgacatcgcggtcatcgtggaacggcaccgggacgcgcacgcctgcttc
aaggccctgtgcgacgccggcgttcccgcggtctacaccggcaacaccgacgtgttcacc
tccgaggccgccgaggactggttgtgcctgctggaggccttcgaccaaccgcaccggccc
ggcatggtccgcgccgccgcggcgacgatgttcttcggcgagacggcccaaacgctggcg
gccggcggcgacgccctgacggaccggatcgcgaaaacgctgcgggagtgggccggtcac
gcccgggaacgcggcgtcgcggccatcttcgaggccgcccagctgctgggtatgcgcgat
cgcgtgctcggctggcggggcggcgagcggcacatgaccgacctggcgcacgtcacccag
ctgctgcaggaggtcgcccaccgcgagcattacggactgccggcgctgcgcgactggctg
cgccggcaacgcgacgagcgtggcggcgcccccgaacgcaaccgccggctcgacagcgac
gccgccgccgtgcagatcatgaccgtcttcgtcagcaagggcctgcaatatccgatcgtg
tacctgccgttcgcgttcaaccgcaacacccaggacagcgacgtggtgctgttccacgac
gaggacggcacgcgttgcctgcacgtcggcggcaaggacagccccgacttcaaaaccgtt
gagcggctgggccgtaaagaggatgccagcgacgacagcaggctgacctacgtcgcgttg
acccgggcgcaggcacaggtggtggcgtggtggtcaccggcgtacttcgagcccaacggc
ggcctgtcgcggctgctacgcgggcgccggcccggcgacccggtcgttccggaccgatgc
gaacccgcgaaggtctccgacgatgacgcactggcccggttgcgcgaatgggaggccgcg
ggcgggccggtcatcgaggactcggtggtggcgcccgcgccgtcgctgccgcccgcgccg
gtgccccggcacctggacagccgccacttccaccgcgccatcgacaccacgtggcggcgc
acctcctattcgggactgatccgggtggcccaggccagcggggtcggcagcgagcccgac
gtcgccgggctcgacgacgaggtcggcgatatcccgttgtcctccccggccgccgggccg
gacgtgccctcgccgatggcggaccttccggcgggcgcgacgttcggctccctggtccac
gccgtgctggagacggccgacccgttcgccgcggatctgaccgccgagctcgaggagcac
atccgggagcattcggcgtggtggccggtcgccgcgacccccgaggagctggccgcggcg
atggtgccgatgcacgacaccccgctgggaccgctggcgggtgggttgacgctgcgccgc
atcgggctctcggatcggttgcgggaactggacttcgagcttccgctggctggcggcgat
cggccgtcggtggggccggaggcccgcctggcggacctggcgccgctgctgcgcgagcac
ctgccgcacgacgatccgctggtgtcgtatgccgaccggctgacggaccgggcgctcggt
gaccagtcgttgcgcgggtacctcaccggctcgatcgacgccgtgctccggattcccgac
ggcgcggggcaccgcttcgtggtggtggactacaagaccaaccggctcggggatcccgag
cggccgctgacggccgccgactacgaccggccgcaaatggcggaggcgatgctgcactcg
gactatccgctgcaggcgttgctgtactgcgcggtgctgcaccggttcctgcggtggcgg
atacgcgattacgacccggacaggcacctcggcggtgtgctctacctgttcgtgcgcggc
atgtgcggcgcggacaccccggtgcgcgacgggcacccgtgcggcgtcttcagttggcgg
ccaccgccgtcgttgatcacggccctgtcggacctgctcgacgcccggacggtgcccgca
tga
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integrated database retrieval system
