Mycobacterium intracellulare subsp. chimaera: AN480_23105
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Entry
AN480_23105 CDS
T04926
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
mchi
Mycobacterium intracellulare subsp. chimaera
Pathway
mchi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mchi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AN480_23105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mchi03400
]
AN480_23105
Enzymes [BR:
mchi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
AN480_23105
DNA repair and recombination proteins [BR:
mchi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AN480_23105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
AAA_11
Viral_helicase1
UvrD-helicase
AAA_22
Helicase_RecD
RecD_N
SH3_13
AAA_16
nSTAND3
AAA_28
Mg_chelatase
AAA_29
TrwB_AAD_bind
SRP54
T2SSE
MukB
NTPase_1
SLFN-g3_helicase
cobW
Motif
Other DBs
NCBI-ProteinID:
AOS93704
UniProt:
A0A7U5MPK8
LinkDB
All DBs
Position
5072991..5074712
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AA seq
573 aa
AA seq
DB search
MTADVMFATGLLRTFSDAGVFEAADVHVAQRLTALTGESDERVALAVALVVRALRGGSVC
VDLRATPGLLGDAELPWPGADDWLAAVQASALLGPPPVLRFFGDLLYFDRYWLEEEQVCT
DLLALSASPVGIESSSYERLFEPGYEEQRAAAEIAVSQAVTVLTGGPGTGKTTTIARLLA
LLLEHAERAGMPPPRIALAAPTGKAAARLAEAVAAGARRLGAADRARLAGLSGTTLHRLL
GPRPDTSVRFKHNRANRLPHDVIVVDETSMVSLTMMARLAEAVRPDSRLILVGDPDQLAS
VEAGAVLADLVDGLSARGDVRVAALRTPHRYGTSIGALAEAIRVGDADRVVELLAAGGEH
VEWVDAQRPADRLREVLVAHALRLRSAALLGAADEALATLDEHRLLCAHREGPYGATHWN
TLVQKWIAEATGQPAWSQWYAGRPLLVTANDYGLRLYNGDTGVAVAGAEGLRAVIAGASG
PLDFATSRLGEVETMHAMTIHKSQGSQADEVTVLIPPEDSRLLTRELFYTAVTRAQTRVR
VVGPEASVRAAIERRAMRATGLRQRLRADAAAT
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgacggcagacgtgatgttcgcgaccggattgctgcgcacgttcagcgatgccggcgtc
ttcgaggcggcggacgtgcatgtggcgcaacggcttaccgcgctcaccggcgagtccgac
gaacgggtcgccctggcggtcgcgctggtggtgcgcgcgctgcggggcggttcggtctgc
gtcgatctccgcgccacgcccgggctgctcggcgacgccgagctgccgtggcccggcgcc
gacgactggctggcggcggtgcaggccagcgcgttactcgggccgccgccggtgctgcgg
tttttcggcgatctgctgtacttcgaccggtactggctcgaggaggagcaggtgtgcacc
gacctgctggccctgtcggcgtcgccggtcggcatcgaatcgtccagttacgaacggctt
ttcgagcccgggtacgaggagcagcgggccgccgccgaaatcgcggtgtcgcaggcggtg
accgtgctgaccggcggccccggcaccggcaagaccaccacgatcgcgcggctgctcgcc
ctgctcctcgagcatgccgagcgggccgggatgccgccgccccggatcgcgctggccgca
ccgaccggcaaggcggcggcgcggctggccgaggcggtggccgcgggagcccgccggctc
ggcgcggccgaccgggcgcggctggccggcctgtccgggaccacgctgcaccggctgctg
ggtccccggccggatacgtcggtgcggttcaagcacaatcgcgccaaccggctgccgcac
gacgtcatcgtggtggacgagacgtcgatggtgtcgttgacgatgatggcccggctggcc
gaagcggtccgcccggactcccggttgattctggtcggcgacccggaccagttggcctcg
gtggaggcgggcgccgtgctggccgacctggtggacgggctgtccgcccgcggcgacgtg
cgggtggccgccctgcgcacgccgcaccgatacggcacgtcgatcggcgcgctggccgag
gcgatccgggtcggcgacgcggaccgggtggtggagctgctggcggccgggggcgagcac
gtcgagtgggtggatgcacagcgcccggccgatcggctgcgcgaggtgctcgtcgcgcac
gcgctgcggctgcggtcggccgcgctgctgggcgcggccgacgaggcgctggccacgctg
gacgaacaccggctgctgtgcgcgcaccgcgagggcccgtacggggcgacgcactggaac
acgttggtgcagaagtggattgccgaggcgacggggcagccggcatggtcgcagtggtac
gccgggcgcccgctgctggtgaccgccaacgactacggcctgcggctctacaacggcgac
accggtgtggcggtggccggcgcggagggcctgcgggcggtcatcgccggtgccagcggg
ccgctagacttcgcgaccagccgtctcggcgaggtggagacgatgcacgccatgaccatc
cacaagagtcagggcagccaggccgacgaggtgaccgtgctgataccgccggaggattcg
cgactgctgacgcgggaactgttctacacggccgtcacccgggcgcagaccagggtgcgg
gtggtcgggcccgaggcctcggtgcgcgcggcgatcgagcgccgggcgatgcgggccacc
ggattgcggcaacggctgcgggccgacgccgccgcgacgtga
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