Methanoculleus chikugoensis: MchiMG62_04250
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Entry
MchiMG62_04250 CDS
T07488
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit B
KO
K03044
DNA-directed RNA polymerase subunit B' [EC:
2.7.7.6
]
Organism
mchk
Methanoculleus chikugoensis
Pathway
mchk03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mchk00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MchiMG62_04250 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mchk03021
]
MchiMG62_04250 (rpoB)
Enzymes [BR:
mchk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MchiMG62_04250 (rpoB)
Transcription machinery [BR:
mchk03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
MchiMG62_04250 (rpoB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
Auto_anti-p27
Vps36-NZF-N
Motif
Other DBs
NCBI-ProteinID:
BBL67244
UniProt:
A0ABM7H3Q6
LinkDB
All DBs
Position
400689..402503
Genome browser
AA seq
604 aa
AA seq
DB search
MRQSRVFVDGALIGLVDDPRELVGRMREMRRRGEISSEVNVSYKEFNNDVIIHTDRGRAR
RPLIVVKDGVPQVSDDDIERLRNGEIVFEDVVRKGAIEFVDAEEEEDLFIAINEGDLTPE
HTHLEIDPSLILGIGAAHVPFPEHNASPRVTMGAGMVKQALGFGTANMKLRPDTRGHMLH
YGQKPLTFTQTSDAIGSDDRPAGQNFVVAIISYEGFNIEDALIINKASIDRGLGRSHFFR
TYDGEERRYPGGQVDRIEIPDEEVSGAHGAEFYANLDVDGVINPETVVREKDVLIGKTSP
PRFLEEPTSELIAVEKRRDTSVTMRSNEHGIVDTVIITEGENSSRLVKVRTRDLRVPEVG
DKFASRHGQKGVIGLIQPSADMPFTESGMTPDLIINPHAVPSRMTIGHMLEMLGGKVGSL
EGRRINATAFRGEREANLRNSLKELGFAHNGREVMYDGTTGRQFAADIYVGVIYYQKLYH
MVSSKMHARSRGPVQVLTRQPTEGRAREGGLRFGEMERDVMIGHGAAMALKERLLDESDK
VTQWVCAKCGMVAMVDRKRKVTRCLACGSETDIYPVEMSYAFKLLLDEMKSMGIAPRLRL
DDMV
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgagacagtcacgtgtcttcgttgacggagcccttatcgggctcgtggacgacccgcgg
gaactggtcgggcggatgcgcgagatgcgccggcgcggcgagatctcctccgaggtcaac
gtatcctacaaggaattcaacaacgacgtcatcatccataccgaccgcggcagggcgcgc
cggccgctgatcgtggtcaaggacggcgttccgcaggtgagcgacgacgacatcgagcgt
ctccggaacggcgagatcgtcttcgaggatgtggtgcggaagggcgcgatcgagttcgtc
gatgccgaagaggaggaggacctcttcatcgccatcaacgagggggatctcactcccgag
cacacgcatctcgagatcgacccctcgctcatcctcgggatcggtgcggcgcacgtcccg
ttccccgagcacaacgccagtccccgtgtcaccatgggcgccgggatggtcaagcaggcg
ctcgggttcgggacagcgaacatgaaactccggcccgatacccgggggcacatgctccac
tacggccagaagccgctcaccttcacccagacttcggacgcgatcggctctgacgaccgg
cccgcaggccagaacttcgtcgttgccatcatctcgtatgaagggttcaacattgaagat
gcgctgatcatcaacaaggcctccatcgaccgcggcctcgggcggtcgcacttcttccgc
acttacgacggcgaagagcggcgctatcccggcggccaggtcgaccggatcgagatcccg
gacgaagaggtctccggtgcgcacggcgccgagttctacgcgaacctggacgtcgacggc
gtcatcaatcccgagacggtcgtccgcgagaaagacgtgctgatcgggaagacttccccg
ccgcggttcctcgaagagccgacgagcgagctcatcgccgtcgagaagcggcgcgacact
tcggtcacgatgcggagcaacgagcacggtatcgtggacaccgtcatcatcaccgagggc
gagaactcttcgcggctggtgaaggtcaggacccgtgacctccgggtgccggaggtcggc
gacaagttcgcttcccggcacggtcagaagggcgtcatcgggctcatccagccatcggcg
gatatgccgttcaccgagtcgggcatgacgcccgacctgatcatcaatccccacgccgtc
ccgagccgtatgaccatcgggcacatgctcgagatgctgggcggcaaggtcggctcgctc
gagggccgccggatcaacgcgaccgcgttccgcggcgagcgcgaggcaaacctccggaat
tcgctcaaggagctcgggtttgcgcacaacggccgtgaagtcatgtatgacggcaccacc
ggccggcagttcgcggccgatatctacgtcggtgtcatctactaccagaaactctatcac
atggtatcgagcaagatgcacgcgcggtcgcgcggtcccgtgcaggtgctcacccgccag
ccgaccgaaggacgtgcccgcgagggcggtctccggttcggtgagatggagcgggacgtg
atgatcggccacggtgcggccatggccttgaaagagcgtctcctcgacgagtcggacaag
gtgacccagtgggtctgcgcgaagtgcggtatggtggcgatggtcgaccggaagcggaag
gtgacgcggtgccttgcctgcggcagcgagaccgatatctaccccgtcgagatgagctat
gccttcaagctcctcctcgacgagatgaagagtatgggcattgctccccgcctgagactc
gacgatatggtgtaa
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