Methanoculleus chikugoensis: MchiMG62_06640
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Entry
MchiMG62_06640 CDS
T07488
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
mchk
Methanoculleus chikugoensis
Brite
KEGG Orthology (KO) [BR:
mchk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mchk03016
]
MchiMG62_06640
Enzymes [BR:
mchk01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
MchiMG62_06640
Transfer RNA biogenesis [BR:
mchk03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
MchiMG62_06640
Prokaryotic type
MchiMG62_06640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PUA
DKCLD
Pus10_C
Motif
Other DBs
NCBI-ProteinID:
BBL67483
LinkDB
All DBs
Position
complement(645608..646516)
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AA seq
302 aa
AA seq
DB search
MTGQDSSVPESGIVVVDKPRGPSSHQVTAWVGDILGRRVGHAGTLDPQVSGVLIVMFGGA
VRLAPVLLSHNKEYVCLMRLHGDASREAVEQAAAEFVGRIYQRPPRKSAVKRNLRIRKIQ
EIEILDIDGRLVLFRVRCDAGTYIRTLCIHMGYAIGTCAHMEELRRIRSGSFDETAAVTL
HELADTAAAAREGDPEPLRRMILPAAAAVADLPKVVIRDTAVDAVCHGAVLAGVGVVGKE
GGFAKGETVAIVTGRGELVGLGKGLVNSSALKPGEPGFVVAPSTVLMRAGTYPRGWKAHA
GS
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
ttgaccggccaggacagttccgtcccggaatccgggatcgtcgtcgtcgacaagccgcgg
gggccgagcagccaccaggtgaccgcctgggtcggagatatcctcgggcggcgggtcggc
cacgccgggacgctcgacccgcaggtctccggggtgctcatcgtcatgttcggcggcgcc
gtccggctcgccccggttctcctctcgcacaacaaggagtatgtctgcctgatgcgtctc
cacggcgacgcctcccgggaggccgtggagcaggcggcagcggagttcgtcggccggatc
taccagcggccgccgagaaagagcgcggtgaaaaggaacctccggatcaggaagatccag
gagatcgagattctggacatagacggccgactcgtcctcttccgggtcaggtgcgacgcc
gggacttacatccggacgctctgcatccatatgggctacgcgattggaacctgcgcccac
atggaggaactccggaggatacgctcgggatcgttcgacgagaccgccgccgtcacgctc
cacgaactcgcggataccgctgcggccgcacgggagggcgatcccgaacccctgcggagg
atgatcctccccgcggcggccgccgtcgccgatctcccgaaggtcgtcatccgcgacacc
gccgtcgacgccgtctgccacggtgcggtgctcgccggggtgggggtcgtcgggaaggag
ggcgggtttgcgaaaggcgagacggtcgcgatcgtgaccgggcgcggcgaactcgtcggg
ctcggaaaggggctcgtcaattcgtcggcgctgaagcccggggaaccggggttcgtcgtc
gcgccctccaccgtcctgatgcgggccggcacctatccccgcggctggaaggcgcacgcc
gggagctaa
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