Methanoculleus chikugoensis: MchiMG62_07720
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Entry
MchiMG62_07720 CDS
T07488
Name
(GenBank) hypothetical protein
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
mchk
Methanoculleus chikugoensis
Brite
KEGG Orthology (KO) [BR:
mchk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mchk03016
]
MchiMG62_07720
Enzymes [BR:
mchk01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
MchiMG62_07720
Transfer RNA biogenesis [BR:
mchk03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
MchiMG62_07720
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
tRNA_int_end_N2
Motif
Other DBs
NCBI-ProteinID:
BBL67591
UniProt:
A0ABN5XFH2
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All DBs
Position
745430..746437
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AA seq
335 aa
AA seq
DB search
MATFDGTWVRLGGEGRALYEQGGYGRPEGTGLRLSPEEALYLMERNKIDVKDFGFDALLG
LFAGQPNFIRRYLVYRDIRERGYVIQPGPQDFRVFRRGHKPGAGKSRYLIRVLSERDIVD
FDRLSQDVLAAVNMRKQYLLAVVDDEDELTYYEVRVQDLPGVGEPAGCATPVEATLFGTY
ALAHLPPGTPLEEDWYGKRLDTERLLLRPVESIYLMRRRCLSVVQDGGQMTAEQFLDAAA
EKDVEIHEKERVFSDLREKGYIPRTGYKFGHHFRVYSGKKSHSEMLVHAVPSGTSTPMSA
VSRSVRLAHSVKKKMLFACIYNTDIRYVEFARIKL
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
ttggcaacattcgacggaacctgggtgcgcctcggcggtgaagggcgggcgctctacgag
cagggcggctacggcaggcccgagggaaccggcctccgcctctctcccgaagaggcgctc
tacctcatggaacgaaacaagatcgacgtgaaagacttcggtttcgacgccctgctcggc
ctctttgccggccagccgaacttcatccgcaggtacctcgtctaccgcgacatccgcgag
cggggatacgtgatccagcccgggccgcaggatttccgcgtcttccgccgcggccacaag
cccggcgccgggaagtcccggtacctgatccgggttctctccgagcgcgacatcgtcgat
ttcgaccggttaagccaggacgtgcttgccgcggtcaacatgcgcaaacagtacctcctc
gcggtcgtcgacgacgaggacgagttgacctactacgaggtgcgggtgcaggatcttccc
ggggtcggggagcctgcgggatgcgcgacgccggtggaggccacgctcttcgggacctac
gcgctcgcccacctgccgccgggaaccccgctcgaagaggactggtacggcaagcggctc
gataccgaacggctcctcctccgcccggtcgagtcgatctatctcatgcgcagacgctgc
ctctcggtcgtgcaggacgggggacagatgaccgcagagcagttcctcgatgcggcggca
gaaaaagacgtcgagatccatgagaaggaacgggtcttctccgacctccgcgagaagggc
tacatcccccggacgggctacaagttcggccaccatttccgcgtctactccgggaagaag
agccattccgagatgctcgtccacgcggttccgtccggaacctctacgccgatgagcgcc
gtctcccgctccgtcaggctcgctcacagcgtcaaaaaaaagatgttgtttgcctgcata
tataacaccgatatcagatacgtcgaattcgcccgaataaaactgtga
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