Methanoculleus chikugoensis: MchiMG62_09190
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Entry
MchiMG62_09190 CDS
T07488
Name
(GenBank) hypothetical protein
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
mchk
Methanoculleus chikugoensis
Pathway
mchk03022
Basal transcription factors
mchk03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mchk00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
MchiMG62_09190
09124 Replication and repair
03420 Nucleotide excision repair
MchiMG62_09190
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mchk03021
]
MchiMG62_09190
03036 Chromosome and associated proteins [BR:
mchk03036
]
MchiMG62_09190
03400 DNA repair and recombination proteins [BR:
mchk03400
]
MchiMG62_09190
Enzymes [BR:
mchk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
MchiMG62_09190
Transcription machinery [BR:
mchk03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
MchiMG62_09190
Chromosome and associated proteins [BR:
mchk03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
MchiMG62_09190
DNA repair and recombination proteins [BR:
mchk03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
MchiMG62_09190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
ResIII
DEAD
AAA_22
AAA_16
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
BBL67738
UniProt:
A0ABM7H553
LinkDB
All DBs
Position
910710..912848
Genome browser
AA seq
712 aa
AA seq
DB search
MCAAKFSRQSRRRSGIILSPAFLAFTFVPGTQTTLTYDVELYAMDSLDDWFPYREYRPHQ
REMLELAASVARDGGIAMIDAPTGSGKSSVASALLAESRGRKVLVAVRTISQLATFMREL
ELIRKKRGNLKFAYLIGKSSMCPLGGEGDIYRRCEGVKSFSTALMRERAQKGSLVPANDR
QIKQQIRKMDPEHPLICPYFIHGKSFVEPEDGGLKMIPSAALRVRAERVSTELIWPDQLA
GFCGDICPYDTMMHAARDAEVVLVNFYHLFDDIIREQLYQSLGIEGHDAMLLIDEAHNCG
DVVQSIESVTIEERDIVQAGHELSGRRRSPQADAIVQILPQITRFMEALKGSHEAEDWFD
PAIFQRMILSGTLYRNVEEIVDDLLKISEGIREKNMQAGEFRESAIERLTEFFYRIFRSA
ADPAYLTVYRKEEDGAVALEVRNIDPSTKLQEIARAHACCVLISGTLSPIESYRRYYFGD
LPVTTISLPNSFPPENRRIFCATDITTAYSMRRDRENLARTEDYITTFAALPGNLAIYFP
SYDLLNTFADRCAPRIRKKQIYIESKDTAASAVMLREFMALPGTGRSGILFAVCGGKWSE
GLDYRGEMLSGALVIGLPLAPFNRVRKMVIDYFRMKFGEEGEFISYTLPAVNRALQALGR
VLRTPEDRGMLVLGEKRFLERRVHAGLPPWMQDEMRTCTVEAFRKEAERWRS
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgtgcgccgcgaagttttcccggcagagtcgccgtagatccggcatcatcctctccccg
gccttcctcgccttcactttcgtcccgggcacccaaactacattgacgtacgacgtcgaa
ctgtatgcaatggatagcctcgacgactggttcccgtaccgggagtaccggcctcatcag
cgggagatgcttgaattggccgcatctgtcgcccgcgacggcggcatcgccatgatcgat
gcgccgaccgggagcggcaagtcgagcgtggcctccgcgctcctcgcggagagccggggc
cggaaagtgctcgtcgccgtccggaccatcagccagcttgcgacgttcatgcgcgagctt
gagctcatccggaagaagcgcggcaacctcaagttcgcctacctcatcggcaagtccagc
atgtgcccgctcggcggcgaaggtgacatctaccggcggtgcgagggcgtcaagtccttc
tcgacggccctgatgcgggagcgggcgcagaaggggtcgcttgtcccggcgaacgaccgc
cagatcaaacagcagatccggaagatggacccggaacacccgctcatctgcccctacttc
atccacggcaaatccttcgtggagcccgaggacgggggattgaagatgatcccgtcggcg
gccctgcgcgtccgggccgagcgggtgagcaccgagctcatctggcccgaccagctggcc
gggttctgcggcgacatctgtccttacgatacgatgatgcacgccgcccgggacgccgaa
gtggtgctcgtgaacttctaccaccttttcgacgatatcatccgggaacagctctaccag
tcgctcgggatcgaggggcacgacgccatgctgctcatcgacgaggcccataactgcggc
gacgtcgtccagagcatcgagagcgtgacgatcgaggagcgggatatcgtgcaggccggc
cacgaactctccggacgccgccggtcgccgcaggcggacgctatcgtccagatcctgccg
cagatcacccggttcatggaggcgctcaaaggttcgcacgaggccgaggactggttcgat
cccgcgatcttccagcggatgatcctctccggcacgctctaccggaacgtggaggagatc
gtggacgacctcctcaagatcagcgaggggatccgcgagaagaacatgcaggcgggcgag
ttccgggagagcgcgatcgagcggctgaccgagttcttctaccggatcttccgctccgcc
gccgacccggcttacctcacggtctaccgcaaagaggaggacggggccgtggcgcttgag
gtccgaaacatcgacccgagcaccaaactccaggagatcgcccgggcgcacgcctgctgc
gtcctgatctcggggacgctctcgcccatcgagagttaccgccgctactacttcggcgac
cttcctgtcacgacgatctcgctcccgaactcctttcccccggagaaccgccgcatcttc
tgcgcaaccgacatcaccaccgcttactcgatgcgccgggaccgggagaacctcgcacgg
accgaggactacatcacgacgttcgccgccctccccgggaacctcgcgatctatttcccc
tcctacgacctcctgaacaccttcgcggatcgctgcgctccccggatcagaaagaaacag
atctacatcgagtccaaggataccgcggcctcggccgtgatgctccgggagttcatggcc
ctccccggaaccggccgctcgggcatcctctttgcggtctgtggcggcaaatggagcgag
ggcctggactaccgcggcgagatgctctcgggggcgctcgtcatcggcctcccgctcgcg
ccgttcaaccgcgtccgcaagatggttatcgactacttccggatgaagttcggcgaggag
ggggagttcatcagttacactctcccggcggtcaaccgcgccctgcaggcgctcggccgg
gtgctccggacgcccgaggacaggggtatgctcgtcctcggggagaagaggttcctggaa
cgccgggttcatgcggggctgccgccgtggatgcaggatgagatgaggacatgcaccgtt
gaagcgttccggaaggaggccgagagatggcgatcctga
DBGET
integrated database retrieval system
