KEGG   Methanoculleus chikugoensis: MchiMG62_21700
Entry
MchiMG62_21700    CDS       T07488                                 
Name
(GenBank) DNA ligase
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
mchk  Methanoculleus chikugoensis
Pathway
mchk03030  DNA replication
mchk03410  Base excision repair
mchk03420  Nucleotide excision repair
mchk03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:mchk00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    MchiMG62_21700
   03410 Base excision repair
    MchiMG62_21700
   03420 Nucleotide excision repair
    MchiMG62_21700
   03430 Mismatch repair
    MchiMG62_21700
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mchk03032]
    MchiMG62_21700
   03400 DNA repair and recombination proteins [BR:mchk03400]
    MchiMG62_21700
Enzymes [BR:mchk01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     MchiMG62_21700
    6.5.1.6  DNA ligase (ATP or NAD+)
     MchiMG62_21700
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     MchiMG62_21700
DNA replication proteins [BR:mchk03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    MchiMG62_21700
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     MchiMG62_21700
DNA repair and recombination proteins [BR:mchk03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     MchiMG62_21700
   NER (nucleotide excision repair)
    Other NER factors
     MchiMG62_21700
   MMR (mismatch excision repair)
    Other MMR factors
     MchiMG62_21700
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase
Other DBs
NCBI-ProteinID: BBL68989
UniProt: A0ABN5XKV2
LinkDB
Position
2201639..2203291
AA seq 550 aa
MGMQFLEFAQVCERLEGTPGRLDMIEQIAAVLPRLDDEELPVFVRFVMGRVFPDWSTKKL
GVGPNLLYDAVAYVVGTKRETVREAINTTGDVGLAVEGLLAKKEQTSFFIEELDLTGVYR
ELERMAVVEGQRSQREKLRVAQRLFGNARPLEGRYLARLMLEELRIGVGEGNVRDAVARA
FEVDVRLVEHAHQALNDLGEVALLARRDPDALSRVTIEPFRPVKMMLAQAGTIAAQIEDH
GEVAVEYKYDGSRFQFHKVGDVCRIYSRKLEDVTESLPDIANLLLEATDHDVILDGEAVA
VRDGRPMPFQYVIRRFRRKHGVDSMMEKIELVPKVFDILYLDGETLMDRPLAERRKALDE
ALRAHVAPQFPAADATAAEAVYADALDLGHEGVMVKVLDSPYTPGVRGRLWVKVKPGVET
LDLAVVGAEWGEGRRAGTFGSFLLAVQDQGRLLPVGKVATGITDEVLADLYALFKDRVIA
RSGKEVTLEPEVVFEVGYSEIQTSPNYASGYALRFPRFVRVREDKSVDEAETLEALVERY
ARQKNGQESL
NT seq 1653 nt   +upstreamnt  +downstreamnt
atgggtatgcagtttctggagttcgcccaagtctgcgagcgcctcgaagggaccccggga
cgcctcgatatgatcgagcagatcgccgccgtcctcccccggctcgacgacgaggagctc
cccgtcttcgtccggttcgtcatgggcagggtctttcccgactggagcaccaaaaaactc
ggtgtgggtccgaacctcctctacgacgccgtggcctacgtcgtcgggacgaagcgggag
accgtccgggaggcgatcaacacaaccggcgacgtgggcctcgccgtcgagggactcctt
gcaaagaaggagcagacgtcgttctttatcgaggaactcgacctcaccggggtctaccgg
gagctcgagcggatggcggtcgtcgaaggacagcggtcgcagcgggagaaactccgcgtg
gcgcagaggctcttcggcaacgcccggccgctcgaggggcgctacctcgcgcggctgatg
ctcgaggaactccggatcggcgtgggggaagggaacgtccgcgacgccgtcgcccgggcg
ttcgaggtcgacgtccgcctggtcgagcatgcccaccaggcgctgaacgatctcggggag
gtcgccctcctcgcccggcgcgaccccgacgcgctctcccgcgtgacgatcgagccgttc
cggccggtgaagatgatgctcgcgcaggcgggaacgatcgccgcccagatcgaggatcac
ggcgaggtggcggtcgagtataagtacgacgggagccggttccagttccacaaggtgggc
gacgtctgccggatctactcgcggaaactggaggacgtcacggaaagcctccccgacatc
gcgaacctcctcctggaggcgaccgaccacgacgtcatcctggacggggaggcggtcgcc
gtccgcgacgggaggccgatgccgttccagtacgtgatccggcggttccgccgcaaacat
ggggtggactcgatgatggagaagatcgaactcgtgccgaaggtcttcgatatcctctac
ctggacggcgagacgctgatggaccgtccccttgcagaacggcgcaaagccctcgacgaa
gcgctccgtgcgcacgtcgctccgcagttcccggccgccgacgcgaccgcagcggaggcg
gtctacgccgacgccctcgacctcgggcacgagggcgtgatggtgaaagtcctcgactcg
ccctacacccccggcgtccggggccggctctgggtgaaggtgaaacccggcgtcgagacg
ctcgacctcgcggtcgtcggggcggagtggggcgagggccggagagccgggacgttcggc
tcgttcctgctcgcggtgcaggaccagggccggctcctcccggtcgggaaggtggctacc
gggatcacggacgaggtgctggccgacctctacgccctcttcaaggacagggtgattgcc
cgctccggaaaagaggtgaccctcgaaccggaggtggtcttcgaggtgggctactccgag
atccagacaagcccgaactacgcgagcggctacgcgctccggttcccgcggttcgtccgg
gtgcgtgaggacaagagcgtggacgaggccgagacccttgaagcgctcgtcgagcgctac
gcccggcagaagaacggacaggagtctctgtag

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