KEGG   Methanoculleus chikugoensis: MchiMG62_22270
Entry
MchiMG62_22270    CDS       T07488                                 
Name
(GenBank) endonuclease
  KO
K04799  flap endonuclease-1 [EC:3.1.-.-]
Organism
mchk  Methanoculleus chikugoensis
Pathway
mchk03030  DNA replication
mchk03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:mchk00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    MchiMG62_22270
   03410 Base excision repair
    MchiMG62_22270
   03450 Non-homologous end-joining
    MchiMG62_22270
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mchk03032]
    MchiMG62_22270
   03400 DNA repair and recombination proteins [BR:mchk03400]
    MchiMG62_22270
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:mchk04147]
    MchiMG62_22270
DNA replication proteins [BR:mchk03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    MchiMG62_22270
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     MchiMG62_22270
DNA repair and recombination proteins [BR:mchk03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     MchiMG62_22270
Exosome [BR:mchk04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   MchiMG62_22270
SSDB
Motif
Pfam: XPG_I XPG_N 5_3_exonuc
Other DBs
NCBI-ProteinID: BBL69046
LinkDB
Position
2260123..2261124
AA seq 333 aa
MGVAIRDILADSKEALTWDDLSGIAALDAHNALYQFLSIIRQPDGTPLMNGAGRVTSHLS
GILFRTVNFLEKGIRPVFVFDGKPPEFKQETIDERRELRARADDAWKTALREGDMEEAYK
QASASTRIDSHTIASSRELLDLLGIPWVQAPSEGEAQAAYMARQGKVTYAVSQDYDSLLF
GSPVLVRNLTVSGRRKMRGRTIAVNPERIVLSSLLDRLGVTREQLVEIGILVGTDFNPGI
RGVGGKTALKIVQKGGFEEAIAEKQPEFDPAPVRDFFLDPPVTDDYTLEWRPPDVDGVIE
MLSGRYDFSEERVSAALAKVSVKATQKTLDAWF
NT seq 1002 nt   +upstreamnt  +downstreamnt
atgggcgttgctatccgagatatcctggcagacagtaaggaggcgttgacgtgggacgat
ctatcgggcatcgccgcattggacgcccataacgcgctctatcagttcctctccatcatc
cggcagccggacggcactccgctgatgaacggtgcgggccgggtcacctcgcacctctcc
ggcatcctcttccggacggtgaacttcctcgaaaaggggatccgcccggtctttgtcttc
gacgggaagcccccggagttcaagcaggagacgatcgacgagcggcgcgaactccgcgcc
agggccgacgatgcctggaagacggcactcagggagggcgacatggaggaggcctacaag
caggcgagcgcttccacccgcatcgacagccacaccatcgcgtcgtcccgcgaactcctc
gacctgctcggcatcccctgggtgcaggcgccaagcgagggcgaagcgcaggcggcgtat
atggcgcggcaggggaaggtcacctacgcggtctcccaggactacgactcgctcctcttc
ggctccccggtgctggtgcgaaacctcaccgtcagcggccgacgaaagatgcgggggcgg
acgatcgccgtgaaccccgagcggatcgtcctctcctccctcctcgaccgcctcggcgtc
acgagagagcaactggtcgagatcggtatcctggtgggcaccgacttcaaccccggaatc
cggggcgtcggcggaaagaccgccctgaagatcgttcaaaaaggcgggttcgaggaggcg
atcgccgagaagcagcccgagttcgatcccgctcccgtccgggacttcttcctcgacccg
ccggtcaccgacgactataccctcgaatggaggccgccggacgtcgacggggttatcgag
atgctctccggccgctacgacttctccgaggaacgggtcagcgccgctctcgccaaggtc
tcggtgaaggcgacgcagaagacgctcgatgcctggttctga

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