Micromonospora chalcea: PVK74_02155
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Entry
PVK74_02155 CDS
T08919
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
mchl
Micromonospora chalcea
Pathway
mchl03030
DNA replication
mchl03430
Mismatch repair
mchl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mchl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PVK74_02155 (dnaE)
03430 Mismatch repair
PVK74_02155 (dnaE)
03440 Homologous recombination
PVK74_02155 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mchl03032
]
PVK74_02155 (dnaE)
03400 DNA repair and recombination proteins [BR:
mchl03400
]
PVK74_02155 (dnaE)
Enzymes [BR:
mchl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PVK74_02155 (dnaE)
DNA replication proteins [BR:
mchl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PVK74_02155 (dnaE)
DNA repair and recombination proteins [BR:
mchl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PVK74_02155 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
Motif
Other DBs
NCBI-ProteinID:
WDQ00620
LinkDB
All DBs
Position
462234..465767
Genome browser
AA seq
1177 aa
AA seq
DB search
MGDSFAHLHVHTEYSMLDGAARLKDLFAEAARLGMPAVAITDHGNMHGANDFYKQAMDAG
VKPILGVEAYVAPESRFHKARVKWGRPEQKSDDVSGNGAITHMTMWAANRDGLHNLFKLN
SRASMEGHYVKWPRMDMELIAEHAQGIMATTGCPSGAVQTRLRLGQFDEALKVAAAYQDI
FGKDNYFLEIMDHGLDIERRVRDGLTEIARKLDIPPVVTNDSHYTHEAQAEAHDVLLCVQ
TGSNVADPNRFRFEGGGYFVKSADQMRAVDSSELWQQGCRNTLLVAEKVDPAGMFTFHNL
MPRFPIPEGETEESWFRKETFAGLKRRFPNGIPEGHVVQAEYELGVIIQMGFPSYFLVVA
DFIQWAKSQGIAVGPGRGSAAGSLVAYALGITDLDPIPHGLIFERFLNPERVSMPDVDID
FDERRRGEVIKYVTDKWGEDKVAQIATFGTIKAKAAIKDSARVLGYPYAVGDRITKAMPP
AVMGKDIPLSGIFDPKHPRYAEAGEIRGLYESDPDVKKVIETAKGIEGLIRQTGVHAAGV
IMSAEPIIEHIPLMRRDSDGVIITQFDYPTCESLGLLKMDFLGLRNLTIIDDAVKNIQLN
HGRELDLLGLPLDDKPAYELLARGDTLGVFQLDGGPMRSLLRLMKPDNFEDISAVLALYR
PGPMGVDSHTNYALRKNGLQEITPIHPELEEPLREILAPTYGLIVYQEQVQRAAQILAGY
TLGQADLLRRAMGKKKKEILDKEFIPFRDGCRERGYSDEAIQAVWDVLVPFAGYAFNKAH
SAAYGLVSYWTAYLKAHYPAEYMAALLTSVGDDKDKMAMYLSECRRMRIQVLPPDVNTSA
GPFTPVGEEIRFGLGAVRNVGANVVASIMRCREEKGDYADFYDFLSKVDAVVCNKKTIES
LIKAGAFDALGHPRKGLLAVHADAIDAYADVKRKEAVGQYDLFGAGFGESETGGTTTVMP
VIGEGEWDKRDKLAFEREMLGLYVSDHPLFGLEHVLGAAADTTIAALSEEGTVPDGAVVT
LAGILSGVQRRVTKQGRAWASATLEDLAGGVETLFFPNTYEVIGQYIAEDAIVVVKGRVD
RRDDTPRIMAMDMSMPDVTSNPANKPVTLTIPVHRCTPPLVERLKETLVLHPGDTEVHVK
LLNGGKVTTLRLGPFRVAPTTALMGDLKSVLGPANVS
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
atgggcgattcgttcgcgcatctgcacgtacacaccgagtactcgatgctcgacggggcg
gcccggctcaaggacctcttcgccgaggcggcgcggctcggcatgccggcggtggcgatc
accgaccacggcaacatgcacggcgcgaacgacttctacaagcaggccatggacgccggg
gtcaagcccatcctcggcgtcgaggcgtacgtcgcgccggagtcgcgcttccacaaggcg
cgggtcaagtgggggcgccccgagcagaagagcgacgacgtctccggcaacggcgcgatc
acccacatgaccatgtgggcggccaaccgcgacggcctgcacaacctgttcaagctcaac
tcccgcgcctccatggagggccactacgtgaagtggccccggatggacatggagctgatc
gccgagcacgcccagggcatcatggccaccaccggctgcccgtccggcgcggtgcagacc
cggctgcggctgggccagttcgacgaggcgctcaaggtcgccgccgcctatcaggacatc
ttcggcaaggacaactacttcctggagatcatggaccacggcctcgacatcgagcgccgc
gtccgcgacgggctcaccgagatcgcccgcaagctcgacatcccgccggtggtcacgaac
gactcgcactacacccacgaggcgcaggccgaggcgcacgacgtgctgctctgcgtacag
accggcagcaacgtggccgaccccaaccggttccggttcgagggcggcggctacttcgtc
aagtccgccgaccagatgcgcgccgtcgactcctccgagctgtggcagcagggctgccgc
aacacgctgctcgtggccgagaaggtcgacccggccggcatgttcacgttccacaacctg
atgccgcgcttcccgatccccgagggcgagaccgaggagtcctggttccgcaaggagacc
ttcgccgggctgaagcgccgcttccccaacggcatccccgagggccacgtcgtccaggcc
gagtacgagctgggcgtcatcatccagatgggcttcccgtcgtacttcctcgtggtcgca
gacttcatccagtgggccaagagccagggcatcgcggtcggccccgggcgtggctcggcg
gccggctcgctcgtggcgtacgcgctcggcatcaccgacctcgacccgatcccgcacggc
ctgatcttcgagcggttcctcaaccccgagcgcgtctccatgcccgatgtcgacatcgac
ttcgacgagcgccggcgcggtgaggtcatcaagtacgtgaccgacaagtggggcgaggac
aaggtcgcgcagatcgccacgttcggcacgatcaaggcgaaggccgcgatcaaggactcg
gcccgggtgctcggctacccgtacgcggtcggcgaccggatcaccaaggccatgcccccg
gcggtgatgggcaaggacatcccgctgtccggcatcttcgacccgaagcacccccgctac
gccgaggcgggcgagatccgtggcctctacgagtccgacccggacgtcaagaaggtcatc
gagaccgccaagggcatcgagggcctgatccggcagacaggtgtgcacgccgccggcgtc
atcatgtccgccgagccgatcatcgagcacatcccgctcatgcggcgtgactccgacggt
gtcatcatcacgcagttcgactacccgacctgcgagtcgctcgggctgctgaagatggac
ttcctcggcctgcgcaacctgacgatcatcgacgacgcggtgaagaacatccagctcaac
cacggccgggagctggacctgctcggcctgccgctggacgacaagccggcgtacgagctg
ctggcccgcggcgacacgctcggcgtgttccagctcgacggcgggccgatgcgctcgctg
ctgcggctgatgaagccggacaacttcgaggacatctccgccgtcctggcgctctaccgg
cccggcccgatgggcgtggactcgcacaccaactacgcgctgcgcaagaacggcctccag
gagatcaccccgatccacccggagctggaggagccgctgcgcgagatcctcgcgcccacc
tacggcctgatcgtctaccaggagcaggtgcagcgcgccgcgcagatcctcgccggctac
acgctcggccaggccgacctgctgcgccgggcgatgggcaagaagaagaaggagatcctg
gacaaggagttcatcccgttccgggacggctgccgcgagcgcggctactccgacgaggcc
atccaggccgtgtgggacgtgctggtgccgttcgccggctacgccttcaacaaggcccac
tccgccgcgtacggcctggtctcctactggaccgcgtacctcaaggcgcactacccggcc
gagtacatggccgccctgctcacctccgtcggtgacgacaaggacaagatggcgatgtac
ctgtccgagtgccgccggatgcgcatccaggtgctgccgccggacgtcaacacctcggcc
gggccgttcaccccggtcggcgaggagatccgcttcggtctcggcgcggtacgcaacgtc
ggcgcgaacgtggtcgcctcgatcatgcggtgccgcgaggagaagggcgactacgccgac
ttctacgacttcctgtccaaggtcgacgccgtggtctgcaacaagaagacaatcgaatcg
ctgatcaaggccggggcgttcgacgcgctcggccacccgcgcaagggcctgctcgcagtg
cacgccgacgccatcgacgcgtacgccgacgtcaagcgcaaggaggcggtcggccagtac
gacctgttcggcgccggcttcggcgagtccgagaccggcggcaccaccaccgtcatgccg
gtcatcggcgagggagagtgggacaagcgcgacaagctcgcgttcgagcgcgagatgctc
ggcctgtacgtctccgaccacccgctgttcggcctggaacacgtgctcggcgccgccgcg
gacaccaccatcgccgcgctgtcggaggagggcacggtgcccgacggcgcggtggtcacc
ctggccggcatcctctccggcgtgcagcgccgggtcaccaagcagggccgggcctgggcg
tcggccaccctcgaagacctcgccggtggcgtggagacgctgttcttcccgaacacgtac
gaggtgatcggccagtacatcgccgaggacgcgatcgtggtggtcaagggccgggtggac
cggcgcgacgacaccccgcgcatcatggcgatggacatgtccatgccggacgtcaccagc
aacccggcgaacaagccggtcacgctcaccatcccggtgcaccgctgcacgccgccgctg
gtggaacggctcaaggagacgctcgtgctgcaccccggcgacaccgaggtgcacgtcaag
ctgctcaacggcggcaaggtcaccacgctgcgcctcggcccgttccgggtcgcgccgacc
actgcgctgatgggtgacctgaagagcgtgctcggcccggccaacgtgagctga
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