Micromonospora chalcea: PVK74_04615
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Entry
PVK74_04615 CDS
T08919
Name
(GenBank) SigB/SigF/SigG family RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
mchl
Micromonospora chalcea
Brite
KEGG Orthology (KO) [BR:
mchl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mchl03021
]
PVK74_04615
Transcription machinery [BR:
mchl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PVK74_04615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
STAS_2
Sigma70_r3
STAS
Sigma70_r4_2
HTH_23
Sigma70_ECF
HTH_Tnp_4
MarR_2
DUF7343
MarR
HTH_24
HTH_Crp_2
HTH_28
HTH_3
TraD
Motif
Other DBs
NCBI-ProteinID:
WDQ01082
LinkDB
All DBs
Position
996586..997719
Genome browser
AA seq
377 aa
AA seq
DB search
MFGQTTTPTPPTTDRGLEDLDAAALAYAARIEGLPPERRQEARDDLVRFALPFAGRLARR
YRGRGEPLEDLEQVARLGLVNAVDRYDPERGSFTAYAAITIVGEIKRHFRDRTWGVHVPR
RLRDLILEVGQATATLTSELSRAPTVAELSARLETPEEEILAALESAAGYSPASLNAPVG
GESSAEFGDLVGESDHALESVDDRVTVSGLLHRLPWRERRILAMRFYGNQTQAEIAARFG
ISQMHVSRLLSRALTWLRQAMLAEAPPPWQNGAAEAEPAKARISVKQNGDRVVVEVGGEV
DRAGADQLRRAVLKAVTGQPREVVVDLVGAGGFDAGGIAALMAGRDAAARTGVPLRLTRV
QPAVRRSLTAAGLPAAD
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgttcggacagaccaccacacccacaccaccgaccaccgaccggggtctggaggacctg
gacgccgcggcgctcgcgtacgcggcccggatcgagggactgccaccggaacggcggcag
gaggcgcgggacgacctggtccggttcgcgctgccgttcgccggccggctggcccggcgc
taccggggacgcggcgagccgctggaggacctggaacaggtggcccgtctcgggctggtc
aacgccgtcgacaggtacgacccggaacggggctcgttcaccgcgtacgcggcgatcacc
atcgtcggcgagatcaaacggcacttccgtgaccgcacctggggcgtgcacgtgccgcgc
cggttgcgcgacctgatcctcgaggtcgggcaggccacggcgacgctcaccagcgagctg
tcccgcgcccccacggtggcggagctgtccgcccggctggagacgccggaggaggagatc
ctcgccgcgctggagtcggccgccggctacagcccggcgtcgctgaacgcgccggtcggc
ggggagagctcggccgagttcggtgacctggtcggcgagtccgaccacgcgctggagtcg
gtggacgaccgggtcacggtcagcggcctgctgcaccggctgccctggcgggagcgccgc
atcctggcgatgcgcttctacggcaaccagacccaggcggagatcgccgcccggttcggc
atctcgcagatgcacgtgtcccggctgctgtcgcgtgcgctgacctggctgcgccaggcg
atgctggccgaggcgccgccgccctggcagaacggcgccgccgaggccgagccggcgaag
gcccgcatctcggtgaagcagaacggcgaccgggtggtcgtcgaggtcggcggcgaggtc
gaccgggccggcgcggaccagctgcgccgggccgtgctcaaggcggtcaccgggcagccc
cgcgaggtggtggtggacctggtcggcgcgggtggcttcgacgccggcgggatcgccgcg
ctgatggccgggcgggacgccgccgcgcgtaccggggtgccgctgcggctgacccgggtg
cagccggcggtgcgccgctcgctgaccgctgccggactgccggccgccgactga
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