Micromonospora chalcea: PVK74_11780
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Entry
PVK74_11780 CDS
T08919
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
mchl
Micromonospora chalcea
Pathway
mchl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mchl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PVK74_11780 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mchl03019
]
PVK74_11780 (recQ)
03400 DNA repair and recombination proteins [BR:
mchl03400
]
PVK74_11780 (recQ)
Enzymes [BR:
mchl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PVK74_11780 (recQ)
Messenger RNA biogenesis [BR:
mchl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
PVK74_11780 (recQ)
DNA repair and recombination proteins [BR:
mchl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
PVK74_11780 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HRDC
DEAD
RecQ_Zn_bind
Helicase_C
HHH
Motif
Other DBs
NCBI-ProteinID:
WDQ02440
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All DBs
Position
2791661..2793532
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AA seq
623 aa
AA seq
DB search
MVSPTDERTTSAPAGSPPTGDALDVLRRVFGYDAFRGFQQDVVEHVVSGGDALVLMPTGG
GKSLCYQIPALVRDGVAVVVSPLIALMQDQVDALTAVGVRAGFLNSTQDPAQRRRIEAAY
LAGELDLLYLAPEGLAVRSTLGLLERGRIALFAIDEAHCVSQWGHDFRPDYLNLSMLHER
WPDVPRIALTATATRATRTEIATRLRLTEARHFVASFDRPNIQYRIVPKREPRRQLLSLL
RDEHPGDAGIVYCLSRASVEKTAEFLVANGIPALPYHAGLDATTRATNQQRFLREDGLVM
VATIAFGMGIDKPDVRFVAHLDLPKSVEGYYQETGRAGRDGLPSTAWLAYGLQDVVQQRK
MIETSEGDLAHRRNLAAHLDAMLALCETVRCRRAQLLEYFGETGVAACGNCDTCLDPPES
WDGTVAAQKLLSTVYRLDRERNQRFGAGHSIDILLGKHTDKIDQHGHDSLSTFGIGTELR
ETEWRGVVRQLLAEGLLAVEGDYGTLALTEASADVLGRRRTVTLRKEPERPAAGRSAKPR
GAATVVADLSPAAAPVFERLRAWRAATAKEQGVPAYVIFHDATLRQIAAEPPASLAELSR
VSGVGENKLAKYGDAILAVLTES
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atggtctcccccaccgacgagcggaccacctccgcaccggccggctccccaccgaccggc
gacgcgctcgacgtgttgcggcgggtcttcgggtacgacgccttccgcggcttccagcag
gacgtcgtcgaacacgtggtgtccggcggcgacgcgctggtgctcatgcccaccggtggc
ggcaagtcgctgtgctaccagatccccgcgctggtccgcgacggcgtggcggtagtggtc
tccccgctgatcgcgctcatgcaggaccaggtcgacgcgctcaccgccgtcggcgtacgc
gccggtttcctcaactcgacgcaggacccggcgcagcggcgccggatcgaggcggcctac
ctggccggcgagctggacctgctctacctcgccccggaagggctggcggtgcggtccacg
ctcggcctgctggaacgcggccggatcgcgctgttcgcgatcgacgaggcgcactgcgtc
tcgcagtgggggcacgacttccgccccgactacctcaacctgtcgatgctgcacgaacgc
tggccggacgtgccgcgcatcgcgctgaccgccaccgcgacccgggcgacccgcaccgag
atcgccacccggctgcggctcaccgaggcccggcacttcgtggccagcttcgaccggccc
aacatccagtaccggatcgtgccgaagcgggagccccgccgccagctgctcagcctgctg
cgcgacgagcacccgggcgacgccggcatcgtctactgcctgtcccgggcctcggtggag
aagaccgccgagttcctggtcgccaacggcatccccgcgctgccgtaccacgccgggctg
gacgccacgacccgcgccaccaaccagcagcgcttcctgcgcgaggacgggctggtcatg
gtcgccaccatcgcgttcggcatgggcatcgacaagcccgacgtacgcttcgtcgcccac
ctggacctgccgaagtcggtcgagggctactaccaggagaccggccgcgccgggcgcgac
ggcttgccgtccaccgcctggctggcgtacggcctgcaggacgtggtgcagcagcgcaag
atgatcgagacgtcggagggcgacctggcgcaccggcgcaacctcgccgcccacctggac
gcgatgctggcgctctgcgagacggtccgctgccgccgcgcccagctgctcgaatacttc
ggcgagaccggcgtggccgcctgcggcaactgcgacacctgcctcgacccgcccgagtcc
tgggacggcactgtcgccgcgcagaagctgctctccaccgtctaccggctcgaccgcgaa
cgcaaccagcgcttcggcgccgggcacagcatcgacatcctgctcggcaagcacaccgac
aagatcgaccagcacggccacgactcgctcagcacgttcggcatcggcaccgagctgcgc
gagaccgagtggcggggcgtggtgcggcaactgctcgccgagggtctgctcgccgtcgag
ggcgactacggcacgctggcgctgaccgaggccagcgcggacgtgctcggccgccgccgt
acggtcacgctgcgcaaggagccggagcggccggcggccggccggtccgccaagccccgg
ggcgcggccactgtggtcgccgacctctcccccgccgccgcgccggtcttcgagcggctc
cgcgcgtggcgcgcggccaccgccaaggagcagggcgtcccggcgtacgtcatcttccac
gacgcgacgctgcggcagatcgccgccgagccgccggcttccctggccgagctgtcccgg
gtcagcggggtgggcgagaacaagctcgccaagtacggcgacgcgatcctggccgtcctc
accgagtcctga
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