Micromonospora chalcea: PVK74_12920
Help
Entry
PVK74_12920 CDS
T08919
Name
(GenBank) DEDD exonuclease domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
mchl
Micromonospora chalcea
Pathway
mchl03030
DNA replication
mchl03430
Mismatch repair
mchl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mchl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PVK74_12920
03430 Mismatch repair
PVK74_12920
03440 Homologous recombination
PVK74_12920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mchl03032
]
PVK74_12920
03400 DNA repair and recombination proteins [BR:
mchl03400
]
PVK74_12920
Enzymes [BR:
mchl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PVK74_12920
DNA replication proteins [BR:
mchl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PVK74_12920
DNA repair and recombination proteins [BR:
mchl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PVK74_12920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
Rv2179c-like
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
WDQ02648
LinkDB
All DBs
Position
3033383..3035140
Genome browser
AA seq
585 aa
AA seq
DB search
MTRAEYVQESLAGLDTAAGSGVDPALPLYATTFVVVDLETTGGAPDGGGITEIGAVKVRG
GEELGVLATLVNPGVPIPPFITVLTGITQAMLLPAPPIEQVLPSFLEFVGDAVLVAHNAP
YDVGFLKAACAKHGYRWPNPRVLDTAALARRVLTRDEVPNRKLGTLAAYFRTATQPTHRA
LDDAKATVDVLHGLIGRLGGHRVDTVGEAIEFARAVTPTQRRKRHLADGLPKVPGVYIFR
AADDRPLYVGTSGDIATRVRSYFTAAEKRARISEMLAAAERVEAVECAHSLEAEVRELRL
IAAHAPPYNRRSKYPERQVWLKLTDEAYPRLSIVRDIAPTDTAYLGPFRSRQAAELAAAG
FHDAVPLRQCTHRLSRRTTTPACALAELGRCPAPCEHRITPEEYDDRAATPFRTATSDDP
GVVVDALLARIEVLSAAQRYEEAAVVRGRLVAVLRAAVRMQRLAALTGIAELAAARPAAR
GGWELALVRHGRLAGAGVSPPGVHPRPTIDAIRATAETVLPGHGPVPAATAEETERILSW
LERPETRLVEASAGWASPVAGAGRFRDLLTKAESGGTHKVSTERS
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
gtgacacgagcggagtacgtccaggagtcgctggccggcctggacactgcggcgggcagc
ggcgtggacccggcgctgccgctctacgcgaccaccttcgtggtggtcgacctggagacc
acgggcggcgcgcccgacggcggcgggatcaccgagatcggcgcggtgaaggtgcgcggc
ggcgaggagctgggcgtgctcgccacgctggtcaacccgggcgtgccgatcccgccgttc
atcaccgtgctcaccggcatcacgcaggccatgctgctgcccgccccgccgatcgagcag
gtgctgccgagcttcctggagttcgtcggcgacgccgtgctggtcgcccacaacgcgccg
tacgacgtggggttcctcaaggcggcctgcgcgaagcacggctaccgctggcccaacccg
cgggtgctggacacggccgcgctggcccggcgggtgctgacccgcgacgaggtgcccaac
cgcaagctgggcacgctcgccgcctacttccgcaccgcgacccagcccacccaccgggcg
ctggacgacgccaaggccaccgtcgacgtgctgcacgggctgatcggccggctcggcggg
caccgcgtcgacacggtcggcgaggcgatcgagttcgcccgcgcggtcacacccacccag
cgccgcaagcggcacctcgccgacgggctgccgaaggtgccgggcgtctacatcttccgg
gccgccgacgaccggccgctctacgtcggcacgtccggcgacatcgccacccgggtgcgc
agctacttcaccgccgcggagaagcgggcccggatctccgagatgctcgccgccgccgag
cgggtggaggcggtcgagtgcgcccactcgctggaggcggaggtccgcgagctgcggctg
atcgcggcgcacgcgccgccgtacaaccgcaggtcgaagtatccggagcgccaggtgtgg
ctgaagctcaccgacgaggcgtacccccggttgtcgatcgtgcgcgacatcgcgccgacc
gacacggcctacctggggccgttccggtcccggcaggcggcggagctggccgccgccggc
ttccacgacgcggtgccgctgcggcagtgcacgcaccggctgtcccggcgcaccaccacg
ccggcctgcgcgctggccgagctgggtcgctgcccggcgccctgcgagcaccggatcacc
cccgaggagtacgacgaccgggcggcgacgccgttccgcaccgccaccagcgacgatccc
ggtgtggtggtggacgcgctgctcgcccgcatcgaagtgctgtcggccgcccagcgctac
gaggaggcggctgtggtgcgcgggcggctggtcgcggtgctgcgcgcggcggtccggatg
cagcggctggccgcgctgaccggcatcgccgagctggccgccgcccggccggcggcccgg
ggcggctgggagctggcgctggtgcggcacgggcggctggcgggggccggggtgtccccg
ccgggtgtccatccgcgaccgacgatcgacgcgatccgggccaccgccgagacggtgctg
cccgggcacgggccggtgccggccgcgaccgccgaggagaccgaacggatcctgtcctgg
ttggagcgaccggagacccgcctggtcgaggcgagcgccggatgggcctcgccggtggcc
ggcgcggggcgtttccgcgacctcctgacgaaggcggagagcggcggaacccacaaagtc
tcgaccgaacgctcatga
DBGET
integrated database retrieval system
