Micromonospora chalcea: PVK74_20515
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Entry
PVK74_20515 CDS
T08919
Name
(GenBank) Fpg/Nei family DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
mchl
Micromonospora chalcea
Pathway
mchl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mchl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PVK74_20515
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mchl03400
]
PVK74_20515
Enzymes [BR:
mchl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
PVK74_20515
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
PVK74_20515
DNA repair and recombination proteins [BR:
mchl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PVK74_20515
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Zn_ribbon_TFIIB
Zn_ribbon_RRN7
NFACT_N
Zn_ribbon_8
Motif
Other DBs
NCBI-ProteinID:
WDP98264
LinkDB
All DBs
Position
4631194..4632054
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AA seq
286 aa
AA seq
DB search
MPELPEVEALAGYLRERAVGRRVERFEVAAISALKTYDPPPSTVAGRTVTGAGRYGKFLD
VRFDEGLHLVVHLARAGWLHYREAFPAATPLRPGKGPIAVRVRLDDGSGFDLTEAGTQKK
LAAYLVTDPALVPGVAKLGPDALEADLPTFAERLRSRRGQVKGVLTDQSVLAGVGNAYSD
EILHAARLSPFAITDRLTDDQLAGLHAATRTVLGDAVRRSMGQRAAELKGEKRSGLKVHA
RKGLPCPVCGDTVREVSFADSSLQYCPTCQTGGKPLADRRLSRLVR
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaacttccggaggtggaagcgctcgccggttacctgcgcgagcgtgcggtgggc
cgccgcgtggagcggttcgaggtcgccgcgatcagcgcgctcaagacgtacgacccgccg
ccgagcactgtcgccggccgtacggtcaccggtgccggccggtacggcaagttcctcgat
gtccggttcgacgagggactgcacctggtggtccacctggcccgggcaggctggctgcac
taccgggaggcgttcccggcggcgaccccgctgcggcccggcaagggcccgatcgcggtg
cgggtacgcctcgacgacggctccggcttcgacctgaccgaggcgggcacccagaagaag
ctggccgcctatctggtcaccgacccggcgctggtgccgggtgtggcgaagctcgggccg
gacgcgctggaggcggatctgccgaccttcgccgagcggctgcgcagtcgccggggccag
gtgaagggcgtgctgaccgaccagtcggtgctcgccggggtgggtaacgcgtactccgac
gagatcctgcacgcggcgcggctgtcgccgttcgcgatcaccgaccggctcaccgacgac
cagctcgccggcctgcacgcggcgacgcgcacggtcctcggcgacgcggtacgccggtcg
atgggccagcgggcggcggagctgaagggcgagaagcgctccgggctcaaggtgcacgcc
cgcaagggcctgccgtgtccggtctgcggcgacacggtgcgtgaggtctcgttcgccgat
tcgagcctccagtactgccccacatgtcagaccggcgggaagccgctggctgaccgaagg
ttgtcccgtctcgtacggtga
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