Micromonospora chalcea: PVK74_21110
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Entry
PVK74_21110 CDS
T08919
Symbol
gyrA
Name
(GenBank) intein-containing DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
mchl
Micromonospora chalcea
Brite
KEGG Orthology (KO) [BR:
mchl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mchl03032
]
PVK74_21110 (gyrA)
03400 DNA repair and recombination proteins [BR:
mchl03400
]
PVK74_21110 (gyrA)
Enzymes [BR:
mchl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
PVK74_21110 (gyrA)
DNA replication proteins [BR:
mchl03032
]
Prokaryotic type
DNA Topoisomerases
PVK74_21110 (gyrA)
DNA repair and recombination proteins [BR:
mchl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
PVK74_21110 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
LAGLIDADG_3
Intein_splicing
TPD52
Motif
Other DBs
NCBI-ProteinID:
WDP98371
LinkDB
All DBs
Position
4756675..4760454
Genome browser
AA seq
1259 aa
AA seq
DB search
MTDTPESTPNEPETPETLAAVVQHDRIEPVGLEVEMQRSYLDYAMSVIVGRALPDVRDGL
KPVHRKILYAMFDSGYRPDRGYVKCSRVVGDVMGQFHPHGDSAIYDALVRMAQPWSLRYP
LVDGNGNFGSPGNDPAAAMRYCLVGDARIRTAEGSVRIGDVVPDAAASSETDVDLKVRDR
NGDLVRASKFFHSGEHPTLRLRTREGYELTGTHNHPVLCLVDVAGVPTLLWKLLAEIAPG
DRVVLQRTVPDEIGYPMLEHVEAAVLAGAFVSEGWVSENRAGFNNVDREFFVRVLTAYDL
AVGGPRYVAERVIASGSRLHELDVQDLTALRASVLGEMVGARSAGKFVPEFVWRGPAAVK
RAFLQALFEGDGSSSLLPRHTIQVSYSTRSERLAREVQQLLLEFGVVSRQCRYDSGEIKV
VVTNRRDARIFAAHVGFLGRKQAKLESELAQVPATSTALSGDHVPFVGDFVREHGASRWT
ERDWLRRHNVDRIERWERDRDEIAARITEPGILDVVEPLVDGRFYYAEVTEITDAGVRPV
YSIRVDTEDHSFVSDGFVSHNTECKLDPLAMEMLRDIDEDTVDLQDNYDGRAKEPTILPS
RIPNLLINGSEGIAVGMATKIPPHNLREIGAAVQWCLEHPEADEATTLEALLEIVKGPDF
PTHGLIVGQAGIQDAYRTGRGSIRMRAVVEVEEDKRGRPALVVSELPYQVNPDNLAERIA
ELIKEGKLAGIADIRDESSGRTGMRIVLVLKRDAVAKVVLNNLYKHTQLQETFGANMLAL
VDGVPRTLNLAQFIRYYVEHQIEVIRRRTAFRLRKAEERAHILRGLSKALDALDEVIALI
RRSPTVEDARQGLIRLLDIDEVQATAILDMQLRRLAALERQRILDDLAKLELEIADLKDI
LAKPERQRRIVSEELGEIVAKWGDDRRTKIVPFDGEVSMEDLIAREDVVVTITRTGYAKR
TKVDLYRSQRRGGKGVSGATLRQDDIVSHFFVCSTHDWILFFTNKGRVYRAKAYELPEAS
RVAKGQHVANLLAFQPDEQIAQIIEIPNYQVAPYLVLATKNGLVKKTRLEEFDSNRSGGI
IAINLRDEDELVGAVLAAPEDDLLLVSKNAQAIRFNATDEALRPMGRATSGVIGMRFSGE
DELLAVEVVREGLDVLVATNGGYAKRTPIEEYPVQGRGGKGVLTAKITERRGGLVGAVVI
DPEDELFAITSNGGVIRTPVKPVRRTRDRNTMGVKLMDLPDGVTIVAIARNADEPDEQD
NT seq
3780 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgatactcccgagtccaccccgaacgagccggagaccccggagacactggccgcg
gtcgtccagcacgaccggatcgagccggtcggcctcgaggtcgagatgcagcgctcgtac
ctcgactacgcgatgagcgtcatcgtcgggcgggccctgccggacgtccgggacgggctc
aagccggtccaccgcaagatcctctacgccatgttcgactccggctaccggccggaccgc
gggtacgtgaagtgctcccgcgtcgtcggcgacgtgatgggccagttccacccgcacggc
gactccgccatctacgacgcgctggtccggatggcgcagccctggtcgctgcgctacccg
ctggtcgacggcaacggcaacttcggctcccccggaaacgacccggccgccgccatgcga
tactgcctcgtcggcgatgcccgcatccgtaccgccgagggttccgtccggatcggcgac
gtcgtgccggacgctgcggcgagcagcgagaccgacgtcgacctcaaggtccgcgaccgc
aacggcgacctggtccgcgccagcaagtttttccactccggcgagcacccgacgctgcgg
ctgcgcacccgtgaggggtacgagctgaccggcacccacaaccacccggtgctctgcctg
gtggacgtggccggcgtgccgaccctgctgtggaagctgctcgccgagatcgccccgggc
gaccgggtggtcctgcagcgcaccgtgccggacgagattggctacccgatgctggaacac
gtcgaggcggccgtgctcgcgggcgcgttcgtgtccgaggggtgggtgtcggagaatcgg
gcgggcttcaacaacgtggaccgggagttcttcgtccgggtcctcaccgcctacgacctc
gcggtcggcggccctcggtacgtcgccgagcgggtcatcgcctccggcagcaggctgcac
gagctcgacgtgcaggacctcaccgcgcttcgggcgagcgtgctcggcgagatggtgggc
gcgcggagcgccggcaagttcgtgccggagttcgtctggcgcggaccggccgcggtcaag
cgggccttcctccaggcgctgttcgagggcgacggttcgtcgtcgctgctgccccgccac
acgatccaggtctcgtactcgacccgcagcgagcggctggcccgcgaggtgcagcagctg
ctgctggagttcggcgtggtcagccggcagtgccggtacgacagcggtgagatcaaggtc
gtcgtcaccaaccgtagggacgcccggatcttcgccgctcacgtcggcttcctcggccgc
aagcaggccaagctggaatccgagctggcccaggtgccggcgaccagcaccgcgctttcc
ggcgatcacgtgccgttcgtcggggacttcgtccgcgagcacggcgcgagccgctggacc
gaacgcgactggctgcgccggcacaacgtggaccggatcgagcgctgggagcgggaccgc
gacgagatcgcggcccggatcaccgagcccggcatcctcgacgtggtcgagccgcttgtc
gacgggcgcttctactacgccgaggtgaccgagatcaccgacgccggtgtgcggccggtc
tacagcatccgggtggacaccgaggaccactcgttcgtctccgacggtttcgtcagccac
aacaccgagtgcaagctcgacccgctggcgatggagatgctgcgggacatcgacgaggac
accgtcgacctgcaggacaactacgacggccgggccaaggagcccacgatcctgccgtcg
cggatcccgaacctgctgatcaacggctccgagggcatcgcggtcggcatggccaccaag
atcccgccgcacaacctgcgcgagatcggcgcggcggtgcagtggtgcctggagcacccg
gaggccgacgaggccaccacgctggaagccctgctggagatcgtcaagggcccggacttc
ccgacccacggcctgatcgtcggccaggcgggcatccaggacgcgtaccggaccgggcgc
ggctcgatccggatgcgcgccgtggtcgaggtcgaggaggacaagcgtggccggccggcg
ctcgtggtcagcgagctgccgtaccaggtcaacccggacaacctcgccgagcgcatcgcc
gagctgatcaaggagggcaagctcgccggcatcgccgacatccgcgacgagtcctccggg
cgtaccggcatgcggatcgtgctcgtgctcaagcgcgacgcggtcgccaaggtggtgctg
aacaacctctacaagcacacccagctccaggagacgttcggcgccaacatgctggcgctc
gtcgacggcgtgccgcgcacgctcaacctggcccagttcatccggtactacgtcgagcac
cagatcgaggtgatccggcggcggaccgcgttccggctgcgcaaggccgaggagcgggcg
cacatcctgcgcggtctgtccaaggcgctggacgcgctggacgaggtgatcgccctgatc
cggcgttcgcccacggtggaggacgcccggcagggcctgatccggctgctggacatcgac
gaggtccaggcgaccgcgatcctggacatgcagctgcgccggctggccgccctggagcgg
cagcgcatcctggacgacctggcgaagctcgaactggagatcgccgacctcaaggacatc
ctggccaagccggagcggcagcggcggatcgtctcggaggaactgggcgagatcgtcgcg
aagtggggcgacgaccggcgtacgaagatcgtcccgttcgacggcgaggtctcgatggag
gacctcatcgcccgcgaggacgtggtcgtgacgatcacccgcaccgggtacgcgaagcgg
acgaaggtcgacctctaccggtcgcagcggcgtggcggcaagggcgtcagcggggcgacg
ctccgccaggacgacatcgtcagccacttcttcgtatgctctacccacgactggatcctg
ttcttcacgaacaagggtcgggtctaccgggcgaaggcgtacgagcttcccgaggccagt
agggtggccaagggccagcacgtggccaacctgctcgcgttccagcccgacgagcagatc
gcgcagatcattgaaatcccgaactaccaggtggcgccctacctggtactggccacgaag
aacggcctggtgaagaagacgcggctcgaggagttcgactccaaccgttccggcggcatc
atcgcgatcaacctgcgcgatgaggacgaactggtcggtgcggtcctggccgctccggag
gatgatctgctgctggtgtcgaagaacgcccaggcgatccgcttcaacgccaccgacgag
gcgctgcgtccgatgggccgggccacgtccggtgtgatcggcatgcgcttcagcggcgag
gacgagttgctcgcggtcgaggtggtgcgagagggtctggacgttctggtcgcgacgaac
gggggttacgcgaaacgtaccccgatcgaggaatacccggtgcagggccggggaggtaag
ggcgtgctgaccgcgaagatcaccgagcgacgcggtggcctggtcggcgcggtagtgatc
gatccggaggacgagctgttcgccatcaccagcaacggcggcgtcatccggactccggtg
aagcctgtacgccgtacgcgtgaccggaacacaatgggggtcaagctgatggacctcccg
gacggcgtgactatcgtggcgattgctcgcaatgccgacgagcctgacgaacaggactag
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