Micromonospora chalcea: PVK74_28625
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Entry
PVK74_28625 CDS
T08919
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
mchl
Micromonospora chalcea
Brite
KEGG Orthology (KO) [BR:
mchl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mchl03016
]
PVK74_28625 (truB)
Enzymes [BR:
mchl01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
PVK74_28625 (truB)
Transfer RNA biogenesis [BR:
mchl03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PVK74_28625 (truB)
Prokaryotic type
PVK74_28625 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
DUF2244
DKCLD
Motif
Other DBs
NCBI-ProteinID:
WDP99765
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All DBs
Position
6310224..6311108
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AA seq
294 aa
AA seq
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MSTDGLIVVDKPGGMTSHDVVARIRRLARTRRVGHGGTLDPMATGVLVIGVGRATRLLTY
VIGAGKSYAATIRLGQATVTDDAEGEVVATTPAGAVTDDGVRAALAALTGEIDQVPSAVS
AIKINGQRAYKRVRDGETVELPARRVTVSRLDVRAIRRDVPDVVDVDVEVTCSSGTYIRA
LARDAGAALGVGGHLTALRRTAVGGFTLAEAATLDELEQRAPDVVNLPLDAAAARFFPRR
DATADETRVLSHGGPLTPAGITGPYAVFDPAGGLIAIVSERDGRARAEIVLAPA
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
gtgagcacagacggtctgatcgtggtcgacaagcccggcggcatgacgtcgcacgacgtc
gtggcccggatccgccggctggcccgtacccgccgggtggggcacggcggcacgctggac
ccgatggccaccggcgtgctggtgatcggggtgggccgggcgacccggctgctcacgtac
gtgatcggcgccggcaagagctacgccgcgacgatccggctggggcaggccaccgtcacc
gacgacgccgagggcgaggtggtcgcgaccaccccggccggcgcggtcaccgacgacggg
gtacgcgccgcgctggccgccctcaccggcgagatcgaccaggtgcccagcgcggtcagc
gccatcaagatcaacggccagcgggcgtacaagcgggtccgtgacggcgagacggtcgag
ctgcccgcccgccgggtcaccgtctcccggctggacgtgcgggcgatccgccgggacgtc
ccggacgtggtggacgtggacgtggaggtgacctgctcgtccgggacgtacatcagggcg
ctggcccgtgacgcgggcgccgcgctcggcgtcggcggccacctcaccgcgctgcgccgc
accgcggtgggcgggttcacgctcgccgaggcggccacgctcgacgagctggagcagcgc
gcgcccgacgtggtgaacctgccgctggacgccgccgccgcgcggttcttcccgcgccgg
gacgccaccgccgacgagacccgggtgctctcccacggcgggccgctgaccccggccggg
atcaccgggccgtacgcggtcttcgacccggcgggcgggctgatcgctatcgtcagcgag
cgggacggtcgggcccgcgcggagatcgtgctggccccggcctga
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