Micromonospora chalcea: PVK74_28735
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Entry
PVK74_28735 CDS
T08919
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
mchl
Micromonospora chalcea
Brite
KEGG Orthology (KO) [BR:
mchl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mchl03009
]
PVK74_28735 (rimO)
Enzymes [BR:
mchl01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
PVK74_28735 (rimO)
Ribosome biogenesis [BR:
mchl03009
]
Prokaryotic type
ribosomal protein modification factors
PVK74_28735 (rimO)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
Beta-prop_NWD2_C
TraT
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
WDP99786
LinkDB
All DBs
Position
6334461..6335963
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AA seq
500 aa
AA seq
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MVSATSSTPQSDGRRVALLTLGCARNEVDSEELAARLHADGWQVTTDGEGADVVVVNTCG
FVEKAKQDSIQTLLAAADTGAKVVAAGCMAERYGRELADSLPEAQAVLSFDDYPDIAARL
DSVLAGEAIGAHTPRDRRELLPLTPVKRRDAAVSLPGHGTPARVAPETDAHTPAHLRQVL
RHRLDTGPVASLKLASGCDRRCAFCAIPAFRGAFVSRTPDELLAEAEWLAKTGVRELVLV
SENSTSYGKDLGDPRALEKLLPQLAAIDGIVRVRASYLQPAETRPGLVEVIATTPGVAAY
FDLSFQHSSEPVLRRMRRFGSTDRFLELLASARALAPDAGARSNFIVGFPGETKQDVAEL
VRFLTEARLDAIGMFDYSDEDGTEAAGLAGKVSAATIKRRYDKLSALADELCSQRAEERL
GATVEVLVDSVADGVVEGRAAHQAPEVDGSTTLVAPVGGGVDLAALRPGDLVRATVTATE
GVDLVAVPDEMISAAPGAVR
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atggtgtctgccacctcctccaccccgcaatccgacgggcgccgggtcgccctgctgacc
ctcggctgcgcccgcaacgaggtcgactcggaggagctggccgcccggctgcacgccgac
ggatggcaggtcaccaccgacggcgagggtgccgacgtggtggtggtgaacacctgcggc
ttcgtcgagaaggccaagcaggactcgatccagacgctgctggccgccgccgacaccggc
gcgaaggtcgtcgccgccgggtgcatggccgagcggtacggccgtgagctggccgacagc
ctccccgaggcgcaggcggtgctcagcttcgacgactacccggacatcgccgcccggctc
gactcggtgctcgccggtgaggcgatcggcgcgcacactccccgcgaccggcgggagctg
ctgccgctgaccccggtgaagcgccgcgacgcggcggtgtcgctgcccgggcacggcacc
ccggcccgggtcgcgccggagaccgacgcgcacaccccggcccacctgcggcaggtgttg
cggcaccggctcgacaccggcccggtggcctcgctgaagctcgccagcggctgcgaccgg
cgctgcgcgttctgcgccatcccggcgttccgcggggcgttcgtctcgcgtaccccggac
gagctgctcgccgaggccgagtggctggccaagaccggcgtccgcgagctggtgctggtc
agcgagaactccacctcgtacggcaaggacctgggcgacccgcgcgcgctggagaagctg
ctgccgcaactcgccgcgatcgacggcatcgtgcgggtccgcgccagctacctccagccc
gccgagacccggcccggcctggtcgaggtgatcgccaccacgcccggcgtggccgcgtac
ttcgacctgtcgttccagcactccagcgagccggtgctgcgccggatgcggcgcttcggc
tccaccgaccggttcctggagctgctcgcctccgcccgcgcgctggcgccggacgcgggc
gcgcgcagcaacttcatcgtcggcttccccggcgagacgaagcaggacgtggccgagctg
gtccggttcctgaccgaggcgcggctggacgcgatcggcatgttcgactacagcgacgag
gatggcaccgaggccgccggcctggccggcaaggtctccgccgccacgatcaagcggcgg
tacgacaagctcagcgcgctggccgacgaactctgctcgcagcgcgccgaggagcgcctc
ggcgcgacggtggaggtgcttgtggactcggtcgcggacggcgtggtggaggggcgggcc
gcccaccaggcgcccgaggtcgacggctcgaccacgctcgtcgcgccggtcggcggcggc
gtcgacctggccgcgttgcgccccggtgacctggtccgggccaccgtcaccgccaccgag
ggcgtggacctggtcgccgtaccggatgagatgatctcggcggcgcccggcgcggtacgg
tga
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