Micromonospora chalcea: PVK74_28860
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Entry
PVK74_28860 CDS
T08919
Name
(GenBank) UdgX family uracil-DNA binding protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
mchl
Micromonospora chalcea
Pathway
mchl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mchl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PVK74_28860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mchl03400
]
PVK74_28860
Enzymes [BR:
mchl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
PVK74_28860
DNA repair and recombination proteins [BR:
mchl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PVK74_28860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
WDP99809
LinkDB
All DBs
Position
6366130..6366828
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AA seq
232 aa
AA seq
DB search
MAETESAPGAQEFIPPSADTIDELRAAAGDCRGCELYRDATQTVFGRGDEHARVVFVGEQ
PGDIEDQKGLPFVGPAGRLLRKAVDDAALDPAQIYLTNAVKHFRFELRGKRRIHQTPDRV
HVTACRPWLVAEFARLRPEIVVVLGATAAKALLGPSFRVTKQRGELLPWPAAAQRPEDFE
RVPVDRTGAVADAPAARLLATIHPSAVLRADNQDVAYEGLVADLKVAAKALR
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atggccgagaccgagagcgcacccggagcgcaggagttcatcccgccgtcggcggacacc
atcgacgaactgcgcgccgcggcgggcgactgccggggctgcgagctgtaccgggacgcc
acccagaccgtcttcggccgcggcgacgagcacgcgcgcgtggtcttcgtcggcgaacag
ccgggcgacatcgaggaccagaagggcctgccgttcgtcggcccggccgggcggctgctg
cgcaaggccgtcgacgacgcggcgctcgaccccgcccagatctacctcacaaacgcggtc
aagcacttccggttcgagctgcgcggcaagcggcgcatccaccagaccccggaccgggtg
cacgtcaccgcctgccggccctggctggtcgccgagttcgcccggctgcgcccggagatc
gtggtggtgctcggcgccaccgccgccaaggcgctgctcggcccgagcttccgggtgacg
aagcaacgcggcgagctgctgccctggcccgccgccgcccagcgcccggaggacttcgaa
cgggtgccggtggaccggacgggcgcggtcgccgacgccccggcggcccggctgctcgcc
accatccacccgtcggcggtgctgcgcgccgacaaccaggacgtcgcgtacgagggcctg
gtcgccgacctgaaggtggccgccaaggcgctgcgctga
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