Paramicrobacterium chengjingii: HCR76_07590
Help
Entry
HCR76_07590 CDS
T07557
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
mchn
Paramicrobacterium chengjingii
Pathway
mchn03030
DNA replication
mchn03430
Mismatch repair
mchn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mchn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HCR76_07590 (dnaE)
03430 Mismatch repair
HCR76_07590 (dnaE)
03440 Homologous recombination
HCR76_07590 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mchn03032
]
HCR76_07590 (dnaE)
03400 DNA repair and recombination proteins [BR:
mchn03400
]
HCR76_07590 (dnaE)
Enzymes [BR:
mchn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HCR76_07590 (dnaE)
DNA replication proteins [BR:
mchn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HCR76_07590 (dnaE)
DNA repair and recombination proteins [BR:
mchn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HCR76_07590 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
MCM10_OB
Motif
Other DBs
NCBI-ProteinID:
QPZ39877
LinkDB
All DBs
Position
1551362..1554883
Genome browser
AA seq
1173 aa
AA seq
DB search
MVSSTDSFVHLHVHSEFSMLDGAARINEVVKAAAEQEMPALAVTDHGNMFGAFDFWSAAT
SAGIKPIIGTEAYITPGTHRSDRTRVRWGDGGRDDVSGSGAYTHMTMLAETTEGMHNLFR
LSSRASIEGYYFKPRMDRETLSQYSKGIIATTGCPSGEVQTRLRLGQYKEAREAAADFRD
IFGHENYYCELMDHGIGIEKRVASELLDLAKDLGLKLVATNDLHYTHASDAKSHSALLCV
QSGATLDDPNRFKFDADEFYLKSAEEMRLLFRDHPDACDNTLEIAERCAVDFDTTANYMP
RFPVPEGETEQTWFVKEIEKGLDYRYPSGVPESVRERADYEIGIISQMGFPGYFLVVADF
INWSKDNGIRVGPGRGSGAGSMAAYAMRITDLDPLEHGLIFERFLNPDRVSMPDFDVDFD
DRRRGEVIKYVTEKYGDERVSQIVTFGTIKAKQALKDSSRVLGFPFGMGEKLTKAMPPPV
MGKDIPLTGIFDKEHPRYREASDIRSVVETDPDAKTVFDTALGIENLKRQWGVHAAGVIM
SSDPLLDIIPVMKREQDGQIVTQFDYPACESLGLIKMDFLGLRNLTVISDALANITMNRQ
ETLDLETLDLDDRPSYDLLARGDTLGVFQLDGGPMRSLLRLMKPDNFEDVSAVIALYRPG
PMGADSHTNYALRKNGLQKITPIHPELAEPLADILDTTYGLIIYQEQVMAIAQKVAGFSL
GQADILRRAMGKKKKSELDKQYVGFSGGMKERGYSDAAIKALWDILLPFSDYAFNKAHSA
AYGVIAYWTAYLKAHYPAEYMAALLTSVGDSRDKLAMYLNECRRMGIQVLPPDVDESINF
FAAVGEDIRFGLGAVRNVGGNVVDGIVAAREKDGRFENFHDFLRKVPAHVTNKRTVESLI
KAGAFDEMGATRRALVEIHEDAVESAVRDKRMEATGQVGFDFDSLFAEVGETVETQVPDR
PEWSKKDKLAFEREMLGLYVSDHPLAGLEVQLAKLASTSITDLTTSEHTQDGDTVTIAGL
VTSVQHRVAKTSGNPYGMITVEDFGAEMTVMFMGKGYQEYQHALQADTIVVVRGRVSMRD
DGMNLHAYSIFAPDLQQDGPSGPLLLNVPEHRATEEAVTELAEILGRHRGDNEVRVRLLR
GDVARVFEVPFPVTVTADLFGELKSLLGPNCLG
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atggtgtcctcaactgactcgttcgtccatctacacgtacatagcgagttttccatgctc
gatggggccgctcgcatcaatgaagtggtcaaggccgctgccgaacaagagatgccggct
ctggctgtaaccgaccacggaaatatgttcggcgcattcgatttttggagtgccgcgacg
tctgcgggcatcaaaccgatcatcggcactgaggcgtacatcacgcccggaacgcatcgc
agcgaccgcacgcgtgtgcgctggggtgatggcggcagagacgatgtctctgggtcgggc
gcttacacgcacatgacaatgctcgccgagacgaccgagggaatgcacaacctcttccgg
ctgtcgtcccgtgcctcgatcgagggctactatttcaagccgcgcatggaccgcgaaacg
ctgtcgcagtactcgaaggggatcatcgccacaaccggatgccccagcggcgaggtgcag
acgcgattgcggctggggcagtacaaagaggctcgagaagccgccgccgacttccgcgat
atcttcgggcacgagaattactactgcgagctgatggatcacggcatcggtatcgagaag
cgtgtcgcgtccgagctgctcgacctcgcgaaagacctcggtctgaagctcgtcgcgacg
aatgacctgcattacacgcacgcgtcagacgcgaagagccactcggctctgctgtgcgtg
cagtcgggagcaacactcgacgaccccaaccgatttaagttcgacgccgacgagttttac
ctgaaatcggcggaagagatgcgcctgctctttcgggaccatccggatgcctgtgacaac
acacttgagatcgctgagcgttgcgctgtcgatttcgatacgacggcgaactacatgccg
cgcttccccgttcccgagggtgagaccgagcagacgtggttcgtcaaagaaatcgagaag
ggccttgactaccggtacccgagcggagtccctgagtccgtgcgggagcgcgctgactac
gaaatcgggatcatctcccagatgggctttccgggctacttccttgtggtcgccgacttc
atcaactggtcgaaagacaatggcatccgcgtcggccccggtcgcgggtctggcgccggc
tcgatggcggcgtatgcaatgcgcatcaccgacctcgacccgctcgagcatgggctgatc
ttcgagcgcttcctcaaccccgaccgcgtgtccatgcccgacttcgacgtcgacttcgat
gatcgtcgccgcggcgaggtgatcaagtacgtcaccgagaaatacggagacgagcgtgtg
tcgcagattgtcaccttcggaacgatcaaagcgaagcaagcgctcaaggactcctctcgg
gtgcttggttttcctttcggaatgggtgagaagcttacaaaggcaatgccgccgcctgtt
atgggcaaagacattccgcttacgggaatcttcgacaaggagcatccgcgttatcgcgag
gcatccgatattcgttctgtcgtcgagaccgaccccgacgccaagaccgttttcgataca
gcactcggcatcgagaatctgaagcgtcagtggggcgttcacgcggcgggcgtgattatg
tcgagcgatccgctccttgacatcatccccgtcatgaagcgcgaacaagacggccaaatt
gtcacgcagttcgactacccggcttgcgagagccttggcctgatcaagatggactttctt
ggtcttcgcaacctcacggtgatctcggatgcactcgcaaatatcacgatgaaccgccag
gagactcttgacctcgagacgctcgacctggacgaccgtccgtcgtacgatcttctcgcc
cggggcgacacccttggtgtgttccagcttgatggcgggcccatgcgcagtcttctgcgc
ttgatgaagcccgacaacttcgaagacgtttcggctgtgatcgcgctgtaccgtcccggt
ccgatgggtgccgactcgcacacgaactatgcattgcgcaagaacggcttgcagaaaatc
acaccgatccaccccgagctcgccgagccactcgccgatattctcgacactacatacggt
ctgatcatctaccaagagcaggtcatggccatcgcgcagaaagtcgccgggttctcgctc
ggccaagcagacatcttgcggcgagcgatggggaaaaagaagaagtcagaactcgacaaa
cagtatgtcggctttagcggaggcatgaaggaacgcggctattcggatgctgcgatcaaa
gcgctgtgggacattctgcttccgttctctgactacgccttcaataaggcgcactccgca
gcgtacggcgtcatcgcttactggacggcgtatctgaaagcccactacccggccgagtac
atggctgcgctgctcacgagcgtcggcgattcgcgcgacaaactggcgatgtatttgaac
gagtgccggcgtatgggaattcaggttcttccccccgatgttgatgagtcgatcaacttc
ttcgcagccgttggggaagatattcgcttcggtctcggtgccgtgcgcaatgtgggcggc
aacgtcgtcgacggtatcgtcgcggcgcgcgagaaagacggacgctttgagaactttcac
gactttctccggaaagttcccgcgcatgtgacgaacaagcggacggttgaatcactgatc
aaggcgggtgccttcgacgagatgggcgcgacgcgccgcgcactcgtcgagatacacgag
gatgccgtggaatctgctgtgcgcgacaagcgcatggaagcgacggggcaagtgggcttc
gactttgacagtctctttgcggaggtcggcgagaccgtggagactcaggttcccgacaga
ccggagtggtcgaagaaagacaaactcgccttcgagcgcgaaatgctcgggctgtacgtc
tcggatcaccccctcgccggccttgaagtgcagctcgccaaactcgccagcacttccatc
accgacttgacaacgtcggagcacacgcaagatggcgataccgtgacgatcgctggtctc
gtgaccagcgtgcagcatcgcgtagcgaagacatcgggcaatccgtacggcatgatcacg
gtggaggacttcggagccgagatgaccgtgatgttcatgggcaaggggtaccaggagtat
cagcatgccctgcaggccgacacgattgtggtcgtgcgagggcgtgtcagcatgcgagac
gacggaatgaatcttcacgcctactcgatcttcgctcccgatctacagcaagatggaccg
tctggtccactgttgctcaacgtgccggagcatcgagcgacggaagaagcggtcacagaa
cttgctgagatcctcggacgacaccggggtgacaacgaagtgcgcgttcggcttcttcgt
ggggacgttgcccgagtttttgaggtgccgtttccggtcacggtaacggccgacctgttc
ggcgaactcaaatcgcttctcgggccgaattgtctcggctag
DBGET
integrated database retrieval system
