Paramicrobacterium chengjingii: HCR76_08105
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Entry
HCR76_08105 CDS
T07557
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
mchn
Paramicrobacterium chengjingii
Pathway
mchn03030
DNA replication
mchn03410
Base excision repair
mchn03420
Nucleotide excision repair
mchn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mchn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HCR76_08105 (polA)
03410 Base excision repair
HCR76_08105 (polA)
03420 Nucleotide excision repair
HCR76_08105 (polA)
03440 Homologous recombination
HCR76_08105 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mchn03032
]
HCR76_08105 (polA)
03400 DNA repair and recombination proteins [BR:
mchn03400
]
HCR76_08105 (polA)
Enzymes [BR:
mchn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HCR76_08105 (polA)
DNA replication proteins [BR:
mchn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
HCR76_08105 (polA)
DNA repair and recombination proteins [BR:
mchn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
HCR76_08105 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HCR76_08105 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
HHH_2
Motif
Other DBs
NCBI-ProteinID:
QPZ39966
LinkDB
All DBs
Position
complement(1657174..1659825)
Genome browser
AA seq
883 aa
AA seq
DB search
MSDNEKPTLLVIDGHSLAFRAFYALPIDSFQNSEGQHTNAIHGFIAMLLNLLKNEKPTHI
AVAFDISRYSFRTREYPEYKGTRGETPPEFIGQIPLLQEALKAMNITTISIEDFEADDIL
ATLSVRGTDEGYRVSVVSGDRDTIQLVNENVTLLYPSRQGVTDLTRYDPAKVKERYDIEP
HQYPEIAALVGETSDNLPGVPKVGEKTAVKWLHRFGSLDEIIAHADEITGKVGESFREHK
DNAVRNRRLNRLVTDVELPCEIGSLAKEPIDQAAVREIFSKLEFRSLLDRVMKLEGVENS
EPAASTVTAPDAQNLLDEELGAWLNRQSQASTNGVAVSVEVVDGRPASIGVSGDTESVAL
AWLPDRADYAPFETWLADASIPKVMHGAKAQLKALTRAGLTVGGLSFDTFIAGWLLRPGG
QEKTLADLVSRYLDEKLPEADPNQLVPEVEPSTAAALAWFTHRLVEPLLTRLDDGSARVL
RDIEMPIVNVLAAIEARGVAMDASALDALSESLGVTARELAEKAFAEIGREINLGSPKQI
QDVLFDQLEMPTTRATKTGYSTDAASLADLQASHPHPFLGLLLEHRDATKLRQIVDTLVK
AIGGDGRIHTSYVQTGTSTGRISSTDPNLQNIPVRTEAGRHIREAFRVGAPYDSLLTADY
SQIEMRIMAHLSEDPGLIEAFRTGEDLHRFVGARIFGVEPADVTSEMRSKVKAMSYGLAY
GLSAFGLSRQLRIDNKEAKQLMSDYFERFGAVREYLRNVVEQAKVDGYTTTIFGRRRPFP
DLKSPNRTLRQNAERAALNAPIQGSAADIIKIAMINIENDIREADLTSRMLMQVHDELVF
EVSDGEHQELERIVRTRMGDAAELSVPLDVQVGYGPNWDAAAH
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
gtgtcggacaacgaaaagcctaccttgctcgtgatcgatggccattcgctggccttccgt
gcgttttacgcactgccgatcgatagttttcagaacagcgaggggcagcatacgaacgcc
atccatggcttcatcgccatgctgctcaacctgctgaagaacgagaagccgacccacatc
gctgtggcgttcgacatttctcgctactccttccgcacgcgtgaatatccggagtacaag
ggaacgcggggggagactccgccggagttcatcggtcagattccgcttctgcaagaagcg
ctcaaagcgatgaacattacaacgatttccatcgaagacttcgaagcagacgacatcctc
gcgacgctctccgtgcgcggtaccgatgagggctatcgcgtgtccgtcgtttctggcgat
cgagacaccattcagctcgtcaacgagaacgtcaccctcctctacccgtccaggcagggt
gtcaccgatctcacgcgctacgacccggctaaggtcaaggaacggtacgacatcgagcct
catcagtatcccgagatcgccgcccttgtcggtgagacgagcgacaatctgcctggcgtt
cccaaagtcggcgagaaaacggcagtgaagtggcttcaccgatttggcagcctcgatgag
atcatcgcccacgctgatgaaatcaccggcaaggtgggtgagagcttccgcgagcacaaa
gacaatgctgttcgcaatcgtcgtctgaatcgcttggtcactgacgttgagcttccgtgc
gagatcggctcgctcgcaaaggagcccatcgaccaggcagcggtgcgcgagatcttctca
aagctcgagttccgctcacttctcgaccgcgtgatgaagctcgagggagtcgagaactcc
gagccagcagcttccaccgtcacggcgcccgacgcccagaaccttcttgatgaagagctc
ggtgcctggctcaatcgtcagtcgcaggcgagcacgaacggtgtcgccgtctctgtggag
gtcgtcgacggccgacccgcctccatcggagtgtcgggcgacacagaatccgttgccctc
gcgtggctaccggatcgagccgactacgctccattcgaaacgtggttggccgacgcaagc
atccccaaggtcatgcacggcgctaaggctcagctcaaagcgttgacccgggcggggctc
acggtggggggtctgtccttcgacacattcatcgccggctggctgctccgcccgggcggt
caagagaagacgctcgcggatcttgtgtcccgctatcttgacgagaagcttcccgaggct
gatcccaaccagctcgtccccgaggtcgagccctcgacggctgcggcgctcgcgtggttt
acacaccgcctcgtcgaaccgctgctcacgcgcctcgatgacggttctgcgcgtgtgctt
cgtgatatcgagatgccgatcgtgaatgtgctcgccgcaatcgaagccaggggagtggcc
atggatgcctctgccctcgacgcgctctctgaatctctgggtgtcacggcacgtgagctc
gcagagaaggcgttcgccgagattgggcgtgaaatcaatctcggttcgccgaagcagatt
caagacgtgctctttgaccagctcgagatgccgacgacccgtgccaccaagacggggtac
tcaacggatgccgcgtctcttgccgaccttcaggcttcgcacccgcacccattcctcggc
ctgcttcttgagcatcgcgatgcgacgaagctgcggcagatcgttgacaccctcgtcaaa
gcgatcggcggcgacggtcgcattcacacgtcgtacgtgcaaacgggaacctcgactggt
cgcatttcgtcgacggatcccaatcttcagaacatccctgttcgcaccgaagccggacgc
cacattcgcgaggcgttccgtgtcggtgctccgtatgacagcctcctcactgcggactac
tcgcagattgaaatgcgcatcatggcgcacctgtcagaagatccggggttgatcgaggcg
ttccgcacgggagaagacctccatagattcgtcggcgctcgcatatttggtgtcgagccg
gcagatgtcacctctgagatgcgctcgaaggtgaaggcgatgtcatatggcctcgcctac
gggctcagcgcattcggcctgtctcgccagctgcgcatcgacaacaaagaggcgaaacag
ctcatgtccgactatttcgaacgattcggagccgtgcgcgaatacctgcgcaacgtcgtt
gagcaggcgaaggtcgatggctacaccacgacgatctttggccgccgcaggccgtttccc
gatctgaagagccccaatcgcactctgcgtcagaatgctgagcgtgcggcgctcaacgcg
ccgattcaaggctctgctgccgacatcatcaagatcgcgatgatcaatatcgagaacgac
attcgcgaggcagatctcacaagtcgcatgctcatgcaggtgcacgacgagttggtgttc
gaggtcagtgacggagagcaccaagaacttgagcgcattgtgcgcacacgcatgggcgac
gctgcagagctcagcgttcccctcgacgttcaggtgggctatgggcccaactgggatgct
gcggctcactga
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