Paramicrobacterium chengjingii: HCR76_09440
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Entry
HCR76_09440 CDS
T07557
Symbol
xerD
Name
(GenBank) site-specific tyrosine recombinase XerD
KO
K04763
integrase/recombinase XerD
Organism
mchn
Paramicrobacterium chengjingii
Brite
KEGG Orthology (KO) [BR:
mchn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mchn03036
]
HCR76_09440 (xerD)
Chromosome and associated proteins [BR:
mchn03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
HCR76_09440 (xerD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_4
Phi_1
Motif
Other DBs
NCBI-ProteinID:
QPZ37100
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All DBs
Position
complement(1933181..1934095)
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AA seq
304 aa
AA seq
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MILERSIDTFLRHVRIERGLAENTVWAYTRDLSRYREWLDENGVDAFTDVTGAHVTAFLR
SLSQSGEKKLSPTSIARSLSSVRSLHRFLLEEGVVAIDVAKEVKPPKQQDRLPKAISIAQ
VEALLATASGDAPQAIRDRALLELLYATGARVSEVCSLNVDDVVDTDIVRLTGKGDKQRI
VPIGSYARTALDEYLVRVRPALSARGAATPALFLGLRGQRVSRQNAWLIIKAAADRAGLA
EHVSPHTLRHSFATHLLQGGADVRVVQELLGHSSVATTQIYTLVTADTLRDMYTQSHPRA
RADS
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgatcctcgagcgttcgatcgacacgtttctgagacacgtgcggatcgaacgcggcctg
gccgagaataccgtgtgggcgtacacgcgcgatctctcgcgctaccgtgagtggctcgac
gagaatggcgtcgacgccttcaccgacgtcaccggtgcacacgtcacggcctttctgcgc
agcctctcgcaaagcggcgagaagaaattgtcgccgacgtcgattgcgcgttcgctgtct
tctgtgcgaagccttcaccgttttctgctcgaagaaggtgttgtcgccatcgatgtggcg
aaagaggtcaagcctcccaagcagcaggacagactaccgaaggcgatatcgatcgcacag
gtcgaggctctgctggcgacagcatccggtgatgcgccgcaggccatcagggaccgcgca
ctactcgagctgctctacgcgacgggcgcacgtgtgtcagaagtgtgctcgctcaacgtt
gacgacgtggtcgacaccgatatcgtacggctgacgggaaaaggcgacaagcagcgcatc
gtgccgatcgggagctacgcgcgcacggcgctcgacgagtatctcgtgcgcgtgcgcccg
gcgctttccgcgcggggagcagcgacgcccgcactttttctcggattgcgcggccagcgg
gtgtcacgccagaatgcctggctgatcatcaaggccgctgccgaccgcgccggcctcgct
gagcacgtctctccccacacgctccgacattctttcgcaacgcacctcttgcaaggggga
gccgacgtgcgtgtggtgcaggagctgctggggcactcctcggtggcgacaacccaaatc
tatacgctggtgaccgccgacaccctgcgagacatgtacacgcagtcgcaccctcgcgcc
cgcgcagattcgtag
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