Paramicrobacterium chengjingii: HCR76_10300
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Entry
HCR76_10300 CDS
T07557
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
mchn
Paramicrobacterium chengjingii
Pathway
mchn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mchn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HCR76_10300 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mchn03021
]
HCR76_10300 (rho)
03019 Messenger RNA biogenesis [BR:
mchn03019
]
HCR76_10300 (rho)
Transcription machinery [BR:
mchn03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
HCR76_10300 (rho)
Messenger RNA biogenesis [BR:
mchn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
HCR76_10300 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA_25
Spore_III_AA
NACHT
AAA_22
Mor
HeH
Motif
Other DBs
NCBI-ProteinID:
QPZ37247
UniProt:
A0ABX6YFS4
LinkDB
All DBs
Position
complement(2110327..2112441)
Genome browser
AA seq
704 aa
AA seq
DB search
MTDAGTRADGADRGTNIQTLKVAELQKLAVSLGVQGASKLRKGELVAAITEKQGGGSNTA
SRPADTQAAAASQEKQPAKRASRRVSTPIIEPATPNSADSDTATPTVPEGTTPEQAAESV
LDEPRAGTQSRTRSSQRSASRSENTGGETASGTTPSDNAASDDAPATQDAADGVEQREKK
NGKRGGRRRGRKGDDDNSDSNGQSGQSNGHNGQNGSKQAESDGRQSSNDDAKSDDTSDSD
AQSGNTNDERGRGRNRNRNRNNRGDNQNDDRQQGRGDRNDGNRTDGKNDDQGGRGRGRYR
DRKRGQNDDVEPEITEDDVLVPIAGILDVLDNYAFVRTTGYLSGASDVYVSLGQVKKYNL
RKGDAIVGAVRQPREGEHNSRQKYNAIVKVDSVNGQSVDEAADRVQFGDLTPLYPQERLR
METEQGKFTQRLIDLIAPVGKGQRGLIVAPPKAGKTIVLQQVANAIAANNPEVHLMVVLV
DERPEEVTDMQRTVKGEVIASTFDRPAEDHTTVAELAIERAKRLVELGHDVVVLLDSITR
LGRAYNISAPTSGRVLSGGVDAAALYPPKRFFGAARNIENGGSLTILATALVETGSKMDE
VIFEEFKGTGNSELRLSRQLADKRIFPAIDVNASSTRREEMLLAQDEVKVTWKLRRALAG
LDTQQALEVVLGKLKETSSNVEFLVQMQKSMPQPATNGHERDHR
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
gtgacagacgcaggaacccgcgcagacggcgcggaccgcggtaccaacatccagacgctc
aaggtcgccgagcttcagaagcttgccgtcagccttggggttcagggcgcttcaaagctc
cgcaaaggcgagcttgttgcggcgataaccgagaagcagggcggcggaagcaacactgct
tcccgaccggcagacacgcaggccgccgctgcatcgcaggaaaagcagccggccaaacgc
gcatcacgacgcgtgtcgactccgatcatcgagccggcgacgccgaactcggccgacagc
gatacggcgacgccgactgttcccgagggaacgactcccgagcaggcagcggagtccgtt
ctcgacgagccccgtgcaggaacgcagagccggacgcggtcgtctcagcgctccgccagt
cgcagcgagaatacgggcggtgagactgcttccggcaccacaccatctgacaacgcagct
tccgacgacgcgcccgctacgcaggacgccgctgacggcgtcgagcagcgcgagaagaag
aacgggaagcgcggcggccgccgtcgcggccgaaaaggcgacgacgacaactcagattcg
aacggccagagcggccagagcaatggccacaatggccaaaacggttcgaagcaggcagag
agcgatggcaggcagtcgtcgaacgacgatgcgaagtcagacgacacatctgattccgat
gcccagagcggcaataccaacgacgagcgaggacgcggacgtaaccgtaaccgcaaccgc
aacaacaggggcgacaaccaaaacgacgatcgccagcaggggcgcggcgaccgcaacgac
ggtaatcgcactgacggaaagaacgacgaccagggcggccgcggccggggccgttatcgg
gaccgcaagcgtggtcagaacgatgacgtcgagccggagatcaccgaagacgacgtgctg
gttccgatcgccggaatccttgatgtgctcgacaactacgcattcgtgcgcacgaccgga
tatctgtccggcgcgagcgacgtatacgtctcactcggccaggtcaagaagtacaacctg
cgaaagggcgacgctatcgtcggagctgtgcgccagccacgtgagggcgagcacaactct
cggcagaagtacaacgcgatcgtcaaggttgacagcgtcaacggccagagcgtcgatgag
gcggccgaccgcgtgcagttcggcgacctgactccgctgtacccgcaggagcgcctgcgc
atggagacggagcagggcaagttcacacagcgcctgatcgaccttatcgcgccagtgggc
aaaggacagcgcggactcatcgtggcgcctcccaaggcggggaagacgatcgttctgcag
caggtggccaatgccatcgcggcgaacaacccggaggttcacctcatggttgttctcgtc
gacgagcgtcccgaagaggtcacggacatgcagcgtacggtcaagggtgaagtcattgct
tcgacattcgaccgccctgctgaagaccacacgaccgtcgctgagctggccattgagcgt
gccaaacgtctcgtagagctcggacacgacgtcgtcgttcttctcgattccatcactcgc
ctgggtcgcgcctacaacatctcggctcccacgagcggtcgtgtgctctcgggtggtgtc
gatgctgcggcgctttacccgccgaagcggtttttcggtgccgcacggaacattgagaac
ggcggatcgctcacgatcctcgcgactgcacttgtcgagaccggttccaagatggacgaa
gtgatcttcgaggagttcaaggggacgggcaactccgaactgcgcctttcgcgtcagctt
gcggacaagcgcatcttcccggcgatcgatgtcaacgcatcgtcgacgcgtcgcgaggag
atgctgctcgcgcaggacgaagtgaaggtgacatggaagctgcgtcgtgccctcgccggc
cttgacacacagcaggcgctcgaagtcgtgctgggcaagctcaaggaaacgtcgtcgaac
gtcgagtttcttgtgcaaatgcaaaagtcgatgccccaaccggcgacgaacggacacgag
cgcgaccaccgctag
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