Paramicrobacterium chengjingii: HCR76_10945
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Entry
HCR76_10945 CDS
T07557
Name
(GenBank) DEAD/DEAH box helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
mchn
Paramicrobacterium chengjingii
Pathway
mchn03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mchn00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
HCR76_10945
09124 Replication and repair
03420 Nucleotide excision repair
HCR76_10945
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mchn03021
]
HCR76_10945
03400 DNA repair and recombination proteins [BR:
mchn03400
]
HCR76_10945
Enzymes [BR:
mchn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HCR76_10945
Transcription machinery [BR:
mchn03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
HCR76_10945
DNA repair and recombination proteins [BR:
mchn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
HCR76_10945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QPZ37359
LinkDB
All DBs
Position
2247046..2248686
Genome browser
AA seq
546 aa
AA seq
DB search
MSDGPLIVQSDRTVLLEVAHPDAEEARHALAVFAELERAPEHVHTYRITRLGLWNARAAG
HRAEEMLATLDAYSKFPVPQTVSTDIADTVSRYGRLVIERNDEGALVLSSQDAAVLTEVS
RAKRIGPLLTDRPSENSFLIEPWARGQVKQELVKLGWPAEDLAGYTPGTPYDIDLHEDSW
ALRDYQHKAIDNFFSGGSGVVVLPCGAGKTLVGAGAMATANTTTLILVTNTVSARQWRDE
LLRRTSLTADEIGEYSGEVKEVKPVTIATYQILTSRRKGEYAHLSLLDALDWGLVIYDEV
HLLPAPVFKLTADLQARRRLGLTATLVREDGRAGDVFSLIGPKRFDAPWKEIESQGYISP
AECFEVRVDMPKADRLEYAASADNERYRLAATTPAKISIVNRLINKHKGERILVIGQYLD
QLDELADVLGAPKLTGATPNDERERLYQQFREGIEPVLVVSKVANFSVDLPEATVAIQVS
GSFGSRQEEAQRLGRLLRPKTSGLTANFYTLVARDTLDQDFAQNRQRFLSEQGYSYSILD
ATSIAA
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacggcccccttatcgttcaaagcgaccgcaccgtgctgctcgaggttgctcac
cccgacgcggaagaagcgcgacacgccctcgccgtgttcgccgagctggaacgcgccccc
gagcacgtccatacctatcgcataacccggcttggcctctggaacgcccgtgcggcaggg
cacagagccgaagagatgctcgcgaccctcgacgcttattcgaagttccctgtgccccag
acggtgtcgacagatatcgccgacaccgtttcgcggtacggccgcctcgtgatcgagcgc
aacgacgagggcgcgctcgtgctgtcgagtcaggatgctgcagtactcaccgaggtgtct
cgcgcaaagcgcatcggtccgctgctcaccgacaggccctctgagaacagcttcctcatc
gaaccatgggctcgcggtcaagtgaagcaggagctcgtgaagctcggctggcccgccgag
gacctcgccggctacacgcccggcaccccgtacgatatcgatctgcacgaagacagctgg
gcgctgcgcgattaccagcacaaggcgatcgacaacttcttcagcggcgggtcgggcgtt
gtcgtgctgccctgcggtgctggaaagacgctcgtcggagctggcgcgatggcgacggcg
aacaccacaacgctcattctcgtgacgaacaccgtctctgcacgccaatggcgtgacgag
ctgctgcgccgcacgagtctcacggcagacgaaatcggcgagtattcgggagaggtgaaa
gaggtgaagcccgtcacgatcgccacctatcagatcctcacctcgcgccgaaagggcgag
tacgctcacctttcgctgctcgacgcccttgactggggtctcgtcatctatgacgaggtg
cacttgcttcccgcccccgtcttcaagctcacggccgacctgcaggctcgacgacgcctc
ggtctcacggcgacactcgtccgcgaagacgggcgagcgggagatgtgttcagcttgatc
ggtcccaagcgcttcgatgctccatggaaagagatcgaatctcagggttacatctccccg
gccgagtgctttgaggtgcgcgtcgatatgcccaaggctgatcgtcttgaatacgcagca
tcggcagacaacgagcgataccggttggccgcgacgactccggcgaagatcagcatcgtc
aaccgcctgatcaacaagcacaagggcgagcgcattctggtgatcggccagtacctcgat
cagctcgacgaacttgctgatgtcttgggcgcgcccaaactcaccggggcgacgccgaac
gacgagcgtgagcggctctaccagcagttccgggaaggcatcgagccggttctcgtcgtc
tcgaaggtggcgaacttctccgtcgatcttccggaagccaccgttgccattcaggtatcc
ggatcgttcggctcgcgccaggaggaggcgcaacgactcggccggctactgcgcccgaag
acgtcggggctcaccgcaaacttctatacgctcgtcgcccgcgacaccctcgatcaggac
ttcgcgcagaacagacagcggttcttgtcagagcagggctacagctactcgattctcgac
gccacgagcatcgccgcgtga
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