Microbacterium chengjingii: HCR76_16700
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Entry
HCR76_16700 CDS
T07557
Name
(GenBank) helix-turn-helix domain-containing protein
Organism
mchn
Microbacterium chengjingii
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_30
GGDEF_2
HTH_23
HTH_8
HTH_1
HTH_Tnp_ISL3
HTH_28
HTH_11
Sigma70_r4_2
LPG_synthase_C
HTH_PafC
HTH_10
HTH_50
Motif
Other DBs
NCBI-ProteinID:
QPZ38397
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Position
3461839..3463344
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AA seq
501 aa
AA seq
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MTPKPVSGLVELRDITGSPELSGLRELYLANPSSPVRALALISDIEELISVGPDTVALLT
PDVARGGWMISAALRYAWERRACAIIVPEQSFTQTVIDLARRLEVSLLTTNHDMRALAID
AAVQMGVARAGSLARVNRFTQRIAQARDLRSALALTSDELDGVDALIETAGAVTLRSSSS
EVKPTATRSHADRAEMDAGYERVAVPITSVDSEFDALVAYVPESAASLAEQILAAATPSV
RALLADARLKSTRDSLPVITITALSGDARGSGVDDPSREALFDEFDWLVGGAYSAVFIMS
DLPEQTGTAVHQLWNAVVPTVPLARLIDGWIGFVPESAGRTRGQLLQRMRQHMERLRKLE
VRVGISAEHSSPQQALRSVREAWLAARTADPLDTSGAALVEFEQLSARLLPQLLPYRLAE
QIGELVIPDLLADPAADELMRAVVVYLSHHGSASAAAEQLGVHRNTLQTRLKRAEKLGVP
LSHPENVLPMHMLLSGLLRGR
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgacgccgaagccagtcagcggactcgttgagttgcgcgacatcaccggatcgccggaa
ctctccggactcagagagctttaccttgcgaatccgtcaagccctgtgcgagcgcttgct
ctcatctccgacattgaagaactgatttccgtgggccccgacaccgtcgcgctcctcact
cccgatgtcgctcgcggcggatggatgatctccgccgcccttcgctacgcgtgggagcgt
cgcgcatgcgcgatcatcgtgccggagcagtcgttcacccagacggtcatcgacctcgcg
cggcgccttgaggtatcgctactcacgaccaaccacgacatgcgcgccctcgccatcgac
gcggcggttcaaatgggtgtcgcacgtgcgggatcactcgcgcgtgtgaacagattcacc
cagaggatcgcccaggctcgcgacctgcggagtgcacttgcactgacgtcggatgagctc
gatggcgttgacgccctcatcgaaacagcgggtgctgtgacgctccgttcgtcgtcatcg
gaggtgaaaccgacggcgactcgatcgcacgctgacagagcggaaatggacgctggatac
gaacgtgttgctgtccccattacctcggttgactccgaatttgatgcgctcgtcgcgtac
gttcctgaaagcgcagcgtcacttgcagaacagattctcgctgcggcaacgccctctgtt
cgtgcacttctcgccgacgcacgattgaaatcaacccgcgattcgctcccggttatcacc
atcacagcgcttagcggagatgcacgaggctccggggttgatgacccgtctcgggaggca
ctcttcgacgagtttgactggctggtgggcggagcgtattccgcggtcttcatcatgtcg
gacctccccgagcaaacgggaaccgccgtccatcaactgtggaacgccgtcgtgccgacc
gttccactcgcgcggttgattgacggatggattggatttgttcccgagtcagccggtcga
actcgtggccaattgctgcagcgcatgcggcagcacatggaacggctccgaaaactcgaa
gtccgtgttggcatctcggccgagcactcctcgccacagcaggctctgagaagtgttcga
gaagcgtggcttgctgcacgcactgcagacccactcgacacgagcggcgcagctctcgtc
gagttcgaacagctttctgcacgccttctccctcagcttctgccgtatcgtctcgccgag
cagatcggggaacttgtaatccccgacctgctcgccgatcctgccgcagacgagctcatg
cgcgcggtcgtcgtgtatctgtcacaccacggttccgcttcggccgctgccgagcagctg
ggtgtacaccgcaatactcttcagacgcgactcaagcgtgcagaaaagctcggcgtcccg
ctttcgcacccagaaaacgtgctaccgatgcacatgctactttccgggctgcttcgcggt
cgctag
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