Mycolicibacterium chitae: MCHIJ_00610
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Entry
MCHIJ_00610 CDS
T06603
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
mcht
Mycolicibacterium chitae
Pathway
mcht03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mcht00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MCHIJ_00610 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mcht03021
]
MCHIJ_00610 (rpoA)
03400 DNA repair and recombination proteins [BR:
mcht03400
]
MCHIJ_00610 (rpoA)
Enzymes [BR:
mcht01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MCHIJ_00610 (rpoA)
Transcription machinery [BR:
mcht03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MCHIJ_00610 (rpoA)
DNA repair and recombination proteins [BR:
mcht03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MCHIJ_00610 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
BBZ00624
LinkDB
All DBs
Position
complement(57341..58393)
Genome browser
AA seq
350 aa
AA seq
DB search
MLISQRPTLSEEVIAEDRSQFVIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRIDGVL
HEFTTVPGVKEDVTDIILNLKGLVVSSEEDEPVTMYLRKQGPGEVTAGDIVPPAGVTVHN
PDMHIATLNDKGKLEVELVVERGRGYVPAVQNKASGAEIGRIPVDSIYSPVLKVTYKVEA
TRVEQRTDFDKLILDVETKNSISPRDALASAGKTLVELFGLARELNVEAEGIEIGPSPAE
ADHIASFALPIDDLDLTVRSYNCLKREGVHTVGELVARTESDLLDIRNFGQKSIDEVKIK
LHQLGLSLKDSPATFDPSEVAGYDAATGTWNSEAGYDPEDNQDYAETEQL
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgctgatttctcagcgtcccaccctgagcgaagaggtcatcgccgaggaccgctcccag
ttcgtcatcgaaccgctggagccgggtttcggttacacccttggcaattcgctgcggcgc
acgctgctgtcgtccatcccgggcgcggcggtcaccagcatccgcatcgacggcgtgctg
cacgagttcaccacggttcccggggtcaaggaagacgtcaccgacatcatcctgaacctc
aagggtctggtcgtgtcctccgaggaggacgagccggtcaccatgtacctgcgcaagcag
ggcccgggtgaggtcaccgcgggcgacatcgtcccgccggccggcgtcaccgtgcacaac
ccggacatgcacatcgcgaccctgaacgacaagggcaagctcgaggtcgagctggtcgtc
gagcggggccgcggctacgtgcccgccgtgcagaacaaggcctccggcgccgagatcggc
cgcatcccggtcgactcgatctactcgccggtgctcaaggtcacctacaaggtggaggcc
acgcgtgtcgagcagcggaccgacttcgacaagctgatcctcgacgtcgagaccaagaac
tcgatcagcccgcgcgacgcgctcgcgtcggccggtaagaccctggtcgaattgttcggt
ctggcacgggaactcaacgtcgaggccgagggcatcgagatcgggccgtcgccggccgag
gcggaccacatcgccagcttcgcgctgccgatcgacgacctggacctcaccgtccgctcg
tacaactgcctcaagcgcgagggtgtgcacaccgtcggcgagctcgtcgcccgcacggag
tccgacctgctggacatccgcaacttcggtcagaagtccatcgacgaggtcaagatcaag
ctgcatcagctgggtctctcgctcaaggacagcccggccaccttcgacccgtccgaggtc
gccggctacgacgcggccaccggaacctggaacagcgaagccggctacgacccggaagac
aaccaggactacgccgaaaccgagcagctctaa
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