Mycolicibacterium chitae: MCHIJ_34400
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Entry
MCHIJ_34400 CDS
T06603
Name
(GenBank) hypothetical protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
mcht
Mycolicibacterium chitae
Pathway
mcht03030
DNA replication
mcht03430
Mismatch repair
mcht03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mcht00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MCHIJ_34400
03430 Mismatch repair
MCHIJ_34400
03440 Homologous recombination
MCHIJ_34400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mcht03032
]
MCHIJ_34400
03400 DNA repair and recombination proteins [BR:
mcht03400
]
MCHIJ_34400
Enzymes [BR:
mcht01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MCHIJ_34400
DNA replication proteins [BR:
mcht03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MCHIJ_34400
DNA repair and recombination proteins [BR:
mcht03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MCHIJ_34400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
Motif
Other DBs
NCBI-ProteinID:
BBZ04003
LinkDB
All DBs
Position
complement(3607953..3609761)
Genome browser
AA seq
602 aa
AA seq
DB search
MRSSDGGQLSFADFDPSADLSLRDTTFVVVDLETTGGRAAPKQPGGACDAITEIGAVKVR
GGEVLGEFATLVDPRRSIPPQIVHLTGITTAMVRAAPTIEAVLPMFLEFARGAVLVAHNA
GFDMGFLRAAAAQCDIAWPRPPVLCTVRLARRVLTRDEAPSVRLADLARLLGAATTPTHR
ALDDARATVDVLHRLIERVGNQGVRTYPALRSYLPDVTPAQRAKRGLATQLPRAPGVYLF
RGPSAEVLYVGTATDLRRRVGQYFNGSDSRARMREMVALAESVDHVECAHALEAGVRELR
LLAAHAPPFNRRSKFPQRWWWVALSDEAFARFVVVRRPRHPGALGPFRSRADVAQTAALL
ARFAGVRTCTTRLGRSARHGPSCPERELSPCPAPRDISAADYAPVAARAADILAGADNAP
LDAAVAEVDALARRGLYENAARLRDHTALAIETAWRGQRLASLVAIDELVAAAPDGAGGW
QLAVVRRGQLAAAGTARRGVPPMPVVAALCAGAQTILSEPAPLGGALVEETALIARWLTT
PGTRIVRTSQGWTSSRHGAGRLAGWAAAARSARLAAEQHRDADADRDPPRRGALSSALRA
SG
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgcgttcgtcggatggggggcagctgagtttcgcggacttcgacccgtccgcggacctc
tccctgcgcgacaccaccttcgtggtcgtggacctcgagaccaccgggggacgcgccgcc
ccgaaacaacccggcggggcgtgcgatgcgatcaccgagatcggcgcggtgaaggtgcgc
ggcggcgaggtgctcggcgaatttgccacacttgtcgatccgcgtcgatccatcccgccg
cagatcgtccatctgaccggtatcaccaccgcgatggtgcgcgccgcgccgaccatcgag
gcggtgctgccgatgttcctcgagttcgcgcgtggcgcggtgctcgtggcccacaacgcc
ggattcgacatgggattcctgcgcgcggccgccgcgcagtgcgacatcgcgtggccgcgt
ccgccggtgttgtgcacggtgcggctggcccgccgcgtgctcacccgcgacgaggcgccc
agcgtccggctcgccgacctcgcccgcctgctgggcgcggccaccaccccgacgcaccgg
gccctcgacgacgcgcgcgccacggtcgacgtcctgcaccgcctgatcgagcgcgtgggc
aatcagggcgtgcgcacgtatccggcgctgcgttcgtatctgcccgacgtcacccccgcg
caacgggccaagcgcgggctggccacccagctgccccgcgcccccggcgtctacctgttc
cgcggcccgtcagcggaggtgctctacgtcggcacggccaccgatctgcggcgccgggtc
gggcagtacttcaacgggtcggactcgcgggcgcggatgcgagagatggtcgcgctggcc
gaatccgtggaccacgtcgaatgcgcgcatgcgctggaggccggggtgcgtgagctgcgg
ctgctcgccgcgcacgccccgccgttcaaccggcgctccaagttcccgcagcgctggtgg
tgggtggcgctgtcggacgaggcgttcgcccgcttcgtggtggtccgccggccgcggcac
ccgggtgcgctcgggccgttccggtcccgcgccgatgtcgcgcagaccgcggcgctgctg
gcccggttcgccggcgtacggacctgcaccacccgcctgggccgctcggcccgccacggt
ccgtcctgcccggaacgcgagctatccccctgcccggcgccgcgcgacatctcggcggcc
gactacgcgcccgtggcggcgcgagccgcggacatcttggccggcgccgacaacgcgccg
ctggacgccgcggtggccgaggtggacgcgctggcgcgccgcggcctctacgagaacgcc
gcgcggctgcgcgatcacaccgccctggccatcgagaccgcctggcgcggacaacgcctg
gcctcgctggtggccatcgacgagctggtggccgcggcgccggacggggccggcggctgg
cagctggcggtcgtacgccgcggtcagctggccgcggcgggcaccgcgcgacgcggggtc
ccgccgatgccggtggtggcggcgctgtgcgccggcgcgcagaccatcctcagcgagccg
gccccgctgggcggcgcgctggtcgaggagaccgcgctgatcgcgcggtggctgacgacg
ccgggcacccggatcgtgcgcaccagccagggttggacgtcctcgcgacacggcgcgggc
cggttggccgggtgggcggccgccgcccggtcggcgcggctggccgccgagcagcaccgc
gacgcggacgccgatcgggatccgccccggcgcggcgcgctcagttcggcgctgcgagct
tctggctga
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