Mycolicibacterium chitae: MCHIJ_39550
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Entry
MCHIJ_39550 CDS
T06603
Symbol
ydcM
Name
(GenBank) transposase
KO
K07496
putative transposase
Organism
mcht
Mycolicibacterium chitae
Brite
KEGG Orthology (KO) [BR:
mcht00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
MCHIJ_39550 (ydcM)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cas12f1-like_TNB
OrfB_IS605
HTH_OrfB_IS605
Zn_ribbon_4
Motif
Other DBs
NCBI-ProteinID:
BBZ04518
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Position
4146587..4147837
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AA seq
416 aa
AA seq
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MLTGRRFRVEFTDEQVEYAERIGAACRAVWNTGLEQRREYRRRGAWMNYQSQAKELAEAK
TEHSWLKAVPGHCLQQTLMDLDRACRERGTFRVRWRSGRRWSPSFRFPEGNKMAVEKLNR
RHGRIKLPKLGWVKFRAGRSLDGETLRSATLSREGRHWFLSVLVDDGRQTPEAHVSPGSA
VGVDRGVAVAIATSDGELIDSQFVAPGERRRGIALQRKLSRCAKRSTNRDKTRAALAAVR
ARERRRRLDFAAQVAHRLAVANAVVVLEDLKTKQMTKSAKGTIESPGRNVAAKSGLNRAI
LSKGWHQFALALSSAARYTGTAVEKVPAAYTSQRCSACGHVDPRSRESQAVFRCTRCTHC
EHADVNAAKNILAAGLAVTACEDQPRPAGRARSPKQEPAGNREELLLQPTTAAPAA
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgttgacggggcggcggtttcgggtcgagttcaccgacgaacaagtcgaatacgctgag
cggatcggggcggcgtgccgggcggtctggaacaccgggctcgagcagcgtcgtgagtat
cgccgtcgtggggcgtggatgaactatcagtctcaggccaaggagttggccgaagcgaag
actgagcattcgtggttgaaagctgttccggggcattgtttgcagcagaccttgatggac
ttggatcgggcgtgtcgtgagcgtggcaccttcagggtgcggtggcgatcagggcgtcgg
tggtcgccgtcgttccggttccccgagggcaacaagatggccgtggagaagctcaaccgt
cgccacggccggatcaagttgcccaagctgggctgggtgaagttccgcgcgggccgcagc
ctcgacggcgagacgctccgttcggccaccctgtcccgagagggccggcattggttcctg
tcggtgctggtcgacgacggccgccagacccccgaggcccatgtgtcgccgggtagcgcg
gtgggggtggaccgcggtgtcgcggtggcgatcgcgaccagcgacggggagctgatcgac
agtcagtttgtggcccctggggagcgtcgccgggggatagcgttgcagcgcaagttgtcg
cggtgtgcgaaacgctcgaccaatcgggacaagactcgcgccgcgttggcggcggtgcgg
gcccgggagcggcggcggcgcctggacttcgccgctcaggtcgcgcaccggctcgcggtc
gccaacgcggtggtggtgctcgaagatctcaagaccaagcagatgacgaaatcggcgaaa
ggaacgatcgaatcgcccgggcgcaacgtggcagccaagtccgggctcaaccgcgccatc
ttgtccaaagggtggcatcagttcgcgttggcattgtcctcggcggcccgctacaccggg
accgccgtggaaaaggtgccggcggcctacacatcgcaacgctgctcagcgtgtgggcat
gtggacccgagatcccgtgagagccaagcggtattccggtgcacccgctgcacgcattgt
gagcacgcggatgtaaacgcagcgaagaacattctggccgcagggcttgcggtcaccgcc
tgtgaagaccaaccgaggcccgcgggccgagcgcggtcaccgaagcaggaaccagcagga
aaccgcgaggaattactgctccaacccaccactgctgcacccgcagcatga
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