KEGG   Mycolicibacterium chitae: MCHIJ_50610
Entry
MCHIJ_50610       CDS       T06603                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
mcht  Mycolicibacterium chitae
Brite
KEGG Orthology (KO) [BR:mcht00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mcht03400]
    MCHIJ_50610
Enzymes [BR:mcht01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     MCHIJ_50610
    5.6.2.6  RNA 3'-5' helicase
     MCHIJ_50610
DNA repair and recombination proteins [BR:mcht03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    MCHIJ_50610
SSDB
Motif
Pfam: DEAD_assoc WH_Lhr WH3_Lhr DEAD WH4_Lhr WH2_Lhr Helicase_C ResIII PhoH AAA_22 AAA_25 DUF6406 EutK_C
Other DBs
NCBI-ProteinID: BBZ05624
LinkDB
Position
5260006..5264580
AA seq 1524 aa
MAPRIDPLARFGGLTRDWFAGTFVAPTPAQAQAWAAIADGENTLVIAPTGSGKTLAAFLW
AIDRLAQDPRTTPSTRVLYISPLKALAVDVERNLRTPLTGIARIAERNNQPAPAITVGVR
SGDTPPNRRRELIAKPPDILITTPESLFLMLTSAARESLTGVQTVIIDEVHAVAGTKRGA
HLALSLERLDALLDTPAQRIGLSATVRPAEEVARFLSGSAAGPTSIVAPPATKTFDLSVQ
VPVPDMANLAEGSIWPDVEERIVDLIEAHNSSIVFANSRRLAERLTARLNEIHAERLGSD
RPNDSPNPRNPTVAGGAPAYVMASGQTLGAEPVLARAHHGSVSKESRAEVENALKSGQLK
AVVATSSLELGIDMGAVDLVIQVETPPSVASGLQRIGRAGHQVGEISQGVLFPKHRTDLI
GCAVTVQRMLGGAIEAMRVPTNPLDVLAQHTVAASALEPLDADVWFDTVRRSAPFATLPR
SAFEATLDLLSGKYPSTEFAELRPRVVYDRDTGTLTARPGAQRLAVTSGGAIPDRGLFTV
YLASSADTEKPSRVGELDEEMVYESRPGDVISLGATSWRITEITHDRVLVVPAPGEPARL
PFWRGDGVGRPAELGAAIGEFTGELARLDREAFTQRCQTIGFDDYAGDNLWQLLDEQKTA
TGTVPSDSALLVERFRDELGDWRVILHSPYGLRVHGPLALAVGKRIYERYGIDEKPTASD
DGIIVRLPDTLNGPETAPGADIFVFEPDEIEPLVTAEVGGSALFASRFRECAARALLLPR
RHPGKRSPLWHQRQRAAQLLDVARHYPDFPIVLEAVRECLQDVYDVPSLVELMARIAQRR
VRVTEVETTTPSPFAASLLFGYVGAFMYEGDSPLAERRAAALALDPTLLAELLGRIELRE
LLDADVIAATTRQLQHLSTERAARDAEGVADLLRLLGPLTSEEIAARADGAEVDEWLAEL
RAAKRALPVSYADKQWWAAVEDIARLRDGVGVAVPVGVATAFLEPVVDPLGELLGRYART
RGPFTTAEAAARFGLGLRVAADVLGRLAVDGKLVRGEFTDVPTDTGHGDQWCDAEVLRIL
RRRSLAALRAQIEPVSTAAYARFLPAWQQVGGEATAGVDGLATVIDQLAGVPMPASAIEP
LIFGQRVRDYQPAMLDELLASGEVIWSGAGPLATGDGWIAFHGADAAPLSLAPPTELEHT
DAHRAILAALDGGGAYFFRQLSTDGIGTGELKEALWQLIWGGHVTGDTFAPVRALLTGGR
RTGARRSSAPAHRHRRAPRMRNYRVDTNLGAHARDSDPTVAGRWSLLPEVELDSTVRAHF
QADQLLARHGVLTRGAVAAENTPGGFATLYKVLAALEEAGRCQRGYFVESLGGAQFATAT
TVDRLRGFADTIDDEQRAGAAQVLAATDPANPYGAALPWPARAVDTDSAHRPGRKAGALV
ALVDGEPAWYLERGGRSLLSFTTDVGVQNAAAAALADLVAQRRIPGLVVERIDGVPVLTG
RDSAAAAALLAAGFARTPRGLRLR
NT seq 4575 nt   +upstreamnt  +downstreamnt
gtggcccctcgaattgatccgctggctcgcttcggcgggctcacccgggattggttcgcg
ggcaccttcgtggcccccaccccggcccaggcccaggcctgggccgcgatcgccgacggc
gagaacaccctggtcatcgcgcccaccgggtccggcaagacgctcgcggcgttcctgtgg
gccatcgaccggctggcccaggatccgcggaccacacccagcacccgggtgctctacatc
tccccgctcaaggccctggccgtcgacgtcgagcgcaacctgcgcaccccgctgaccggg
atcgcgcggatcgccgagcgcaacaatcaacccgccccggcgatcaccgtgggcgttcgg
tccggggacaccccgcccaaccgtcgtcgggaactgatcgccaagccacccgacatcctg
atcaccaccccagagtcgctgttcctcatgctgacctcggccgcgcgcgagtcgctgacc
ggcgtgcagacggtcatcatcgacgaggtgcacgcggtggccggcaccaagcgcggcgcc
cacctggcgctgtcgctggaacgcctcgatgccctgctggacacaccggcgcagcggatc
ggcctgtcggccaccgtgcggccggccgaggaggtggcccggttcctgtcgggctcggcc
gccggcccgaccagcatcgtcgcgccgccggcgaccaagaccttcgacctcagcgtgcag
gtgcccgtgccggacatggccaatctggccgagggctccatctggcccgacgtcgaggaa
cgcatcgtcgatctcatcgaggcgcacaactcctcgatcgtgttcgccaactcgcggcgg
ctggccgagcggctcaccgcccggctcaacgagattcacgccgagcgcctcggctccgac
cgtccgaacgacagtccgaacccgcgcaatcccacggtggccggcggcgccccggcctac
gtcatggctagcgggcagaccctcggcgccgaaccggtgttggcccgcgcccaccacggc
tcggtgtccaaggagtcgcgcgccgaggtcgaaaacgcgctcaagagcggccaactcaag
gccgtggtggccacctcgagcctggagttgggcatcgacatgggcgcggtggacctggtg
atccaggtcgagaccccgccctcggtggccagcggcctgcagcggatcggccgcgcgggc
catcaggtcggcgagatcagccagggcgtgctgttccccaagcaccgcaccgacctgatc
gggtgcgcggtgacggtgcaacgcatgctgggcggggccatcgaggccatgcgggtgccc
accaacccactcgacgtgctggcccagcacacagtggccgccagcgcgctggagccgctg
gacgccgacgtgtggttcgacacggtgcgccgcagcgccccgttcgcgacgttgccgcgc
agcgccttcgaggccaccctggacctgctcagcggcaagtacccgtccaccgagttcgcc
gagctgcgaccgcgggtggtctacgaccgcgacaccggcaccctgacggcgcggcccggc
gcccagcgcctggccgtcacctccggcggcgccatcccggaccgcggcctgttcacggtg
tacctggccagcagcgccgacaccgaaaaaccctcccgggtgggtgaactcgacgaggag
atggtgtacgagtcgcgccccggcgatgtgatctcactcggcgccaccagctggcggatc
accgagatcacccacgaccgggtgctggtggtccccgcccccggtgagccggcccggctg
ccgttctggcgcggcgacggggtgggccggccggccgaactcggggccgcgatcggcgag
ttcaccggcgaactggcgcgccttgaccgcgaggcgttcacccagcgctgtcagacgatc
ggcttcgacgactacgcaggagacaacctgtggcagctgctggacgagcagaagaccgcc
accggcaccgtgccgtcggacagcgcgctgctggtcgagcggttccgcgacgaactcggc
gactggcgggtcatcctgcactcgccgtacgggctgcgggtgcacgggccgctggcgctg
gcggtcggcaagcggatctacgagcgctacggcatcgacgagaagcccaccgcctccgac
gacggcatcatcgtgcgcctgcccgacaccctcaacggacccgaaaccgcgcccggggca
gacattttcgtcttcgagcccgacgagatcgagccgctggtcaccgccgaggtcggcggc
tcggcgctgttcgcgtcccgcttccgggagtgcgcggcgcgggcgttgctgctgccgcgc
cgccaccccggcaagcggtccccgctgtggcatcagcgccagcgcgctgcgcaactgctc
gacgtggcccggcactaccccgacttccccatcgtcctcgaggccgtgcgggaatgcctg
caggacgtctacgacgtgccgagcctggtcgagctgatggcccggatcgcgcagcgccgg
gtgcgcgtcaccgaggtcgagaccaccaccccgtcgccgtttgcggcgtcgctgctgttc
ggctacgtcggggcgttcatgtacgagggcgacagcccgctggccgaacggcgcgcggcc
gcactggcgttggaccccaccctgctggccgagttgttgggccgcatcgagttgcgggaa
ctgctcgacgccgacgtcatcgccgcgaccacccgtcagctgcagcacctcagcaccgag
cgggccgcacgggacgccgagggcgtcgccgacctgctgcggctgctcgggccgctgacg
agcgaggagatcgccgcgcgcgccgacggcgccgaggtcgatgagtggctggcggagctg
cgggcggccaagcgggcgctgccggtctcctacgccgacaagcagtggtgggccgcggtg
gaggacatcgcccggctgcgtgacggggtcggggtggcggtgccggtgggcgtggccacg
gcgttcctcgaacccgtcgtcgacccgctcggcgagctgctgggccgctacgcgcgcacc
cgcggaccgttcaccaccgccgaggccgcggcgcggttcgggctgggcctgcgggtggcc
gccgacgtgctgggccgcctcgcggtcgacggcaagttggtgcgcggcgaattcaccgac
gtccctaccgataccggccacggcgaccaatggtgcgacgcggaggtgctgcgcatcctg
cggcggcgctccctggcggcgctgcgcgcccagatcgagccggtcagcaccgccgcctat
gcccgcttcctgccggcctggcagcaggtgggcggtgaggcgaccgccggtgtcgacggc
ctggccaccgtgatcgatcaactggccggcgtgccgatgccggcctccgcgatcgaaccg
ctgatcttcgggcaacgggtgcgcgactatcaaccggcgatgctggacgaactgctggcc
tccggcgaggtgatctggtccggcgccggcccgctggccaccggcgacggctggatcgcg
ttccacggcgcggacgcggccccgctgtcgttggcgcccccgaccgagctcgagcacacc
gacgcccaccgcgccatcctggcggcgctcgacggcgggggcgcgtacttcttccgtcag
ctcagcaccgacgggatcggcaccggtgagctcaaagaggcgctgtggcagctgatctgg
ggcggccacgtcaccggcgacacgttcgccccggtccgggcgctgctgaccggcggccgg
cgcaccggcgcccgccggtcgagcgccccggcgcatcggcaccgccgcgccccccggatg
cgcaactaccgcgtcgacaccaacctcggcgcgcatgcgcgggacagcgacccgacggtg
gccgggcgctggtcgctgctgccggaagtggagctggattcgacggtgcgcgcgcacttc
caggccgatcagctgctggcccggcacggcgtgctgacccgcggcgcggtcgccgccgag
aacaccccgggcgggttcgccacgctctacaaggtgctcgccgcgctggaggaggccggc
cgctgccagcgcggctatttcgtcgaatccctgggtggggcgcagttcgccacggccacc
accgtggatcggttgcgcggcttcgccgacaccatcgacgacgagcagcgcgccggtgcc
gcgcaggtgctcgccgcgaccgaccccgccaacccctacggcgccgcgctgccctggccc
gcccgggccgtcgacaccgacagcgcgcaccgcccgggccgcaaggctggtgccctggtg
gccctcgtcgacggcgagccggcctggtacctcgaacgcggcgggcgttcgctgctgagc
ttcaccaccgacgtcggcgtgcagaacgcggcggccgcggcgctagcggatctggttgcg
cagcgccggatcccgggcctggtggtggagcgcatcgacggcgtgccggtgctcaccggc
cgcgactcggccgccgccgcggcgctactggccgccgggttcgcccgcaccccgcgtgga
ctgcggttgcgctga

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