Mesorhizobium ciceri biovar biserrulae: Mesci_3615
Help
Entry
Mesci_3615 CDS
T01401
Name
(GenBank) DNA-directed RNA polymerase, beta' subunit
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
mci
Mesorhizobium ciceri biovar biserrulae
Pathway
mci03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mci00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Mesci_3615
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mci03021
]
Mesci_3615
03400 DNA repair and recombination proteins [BR:
mci03400
]
Mesci_3615
Enzymes [BR:
mci01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Mesci_3615
Transcription machinery [BR:
mci03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Mesci_3615
DNA repair and recombination proteins [BR:
mci03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Mesci_3615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
DUF6744
RnfC_N
Motif
Other DBs
NCBI-ProteinID:
ADV12735
UniProt:
E8TLI4
LinkDB
All DBs
Position
3771908..3776104
Genome browser
AA seq
1398 aa
AA seq
DB search
MNQEVMNLFNPQAPAQVFDSIRISLASPEKILSWSFGEIKKPETINYRTFKPERDGLFCA
RIFGPIKDYECLCGKYKRMKYKGVICEKCGVEVTLSRVRRERMGHIELAAPVAHIWFLKS
LPSRIGTLLDMTLKDIERVLYFENYIVTEPGLTALKEHQLLSEEEYMIAVDEYGEDSFTA
MIGAEAIHDLLAGMDLEKIAGDLRSELASTTSELKQKKYLKRLKVVENFMESGNRPEWMI
MKVVPVIPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLIELRAPGIIVRNEKRM
LQEAVDALFDNGRRGRVITGANKRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVTG
PELKLHQCGLPKKMALELFKPFIYARLDAKGYSSTVKQAKKLVEKERPEVWDILDEVIRE
HPVLLNRAPTLHRLGIQAFEPILIEGKAIQLHPLVCTAFNADFDGDQMAVHVPLSLEAQL
EARVLMMSTNNILHPASGAPIIVPSQDMVLGLYYLSIVNQNEPGEGMVFADMGELQHALE
TKAVTLHSKIKGRFRTVDAEGKVVSKIHDTTPGRMIIGELLPKNVNVPYETANQEMTKKN
ISKMIDTVYRHCGQKETVIFCDRIMALGFSHACRAGISFGKDDMLIPDAKIKLVSDTEAL
AKEYEQQYNDGLITQGEKYNKVVDAWAKCSEKVADEMMARIKAVEFEDNGRQKPMNSIYM
MSHSGARGSPTQMRQLAGMRGLMAKPSGEIIETPIISNFKEGLTVLEYFNSTHGARKGLA
DTALKTANSGYLTRRLVDVAQDCIVNSVDCGTDKGLTMQPIVDAGQVVASVGQRVLGRTS
LDDITHPVSGEILVKAGTLMDERDVEQIEKAGVQSVRIRSALTCEVRVGVCAVCYGRDLA
RGTPVNQGEAVGVIAAQSIGEPGTQLTMRTFHMGGTAQVVDSSFLEASYEGKVEIRNRNV
VRNSDGQQMVMGRNMAVLILDEAGKERASHRLTYGSRIFVDDGDKVKRGQRIAEWDPYTR
PVLTEIEGRVSYEDLVDGISVQETADESTGITKREVIDWRSTPRGNDLKPAIAIQDAKGK
VGKLSKGGDARFLLSVEAILSVEPGSQVRPGDVLARIPMESAKTKDITGGLPRVAELFEA
RRPKDHAIIAEIDGTIRFGRDYKNKRRIIIEPHDSTLEPVEYLIPKGKPFHLQDGDVIEK
GDYILDGNPAPHDILAIKGVEALASYLVNEIQEVYRLQGVSINDKHIEVIVRQMLQKVEI
TVQGDSTYIPGDHVDVIELEEVNERLVEDGKKPAEGLPVLLGITKASLQTPSFISAASFQ
ETTRVLTEAAVAGKTDMLQGLKENVIVGRLIPAGTGGTMSQIRRIATSRDELIIDERRKA
SGAEVAEPMLADMTTAAQ
NT seq
4197 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaagaggtcatgaatctcttcaatccgcaggcgcctgcgcaggtgttcgattcc
atccggatatcgcttgccagccctgagaagattctgtcctggtctttcggcgagatcaag
aagccggagaccatcaactaccgcaccttcaagccggagcgtgacggtctgttctgcgcg
cgcatttttggcccgatcaaggactatgagtgcctgtgcggcaagtacaagcgcatgaag
tacaagggcgtcatctgcgagaagtgcggcgtcgaagtcacgctgtcgcgcgttcgccgc
gagcgcatgggccatatcgagctggcggcaccggtcgcccatatctggttcctgaagtcg
ctgccgtcgcgcatcggcacgctgctcgacatgaccctgaaggacatcgagcgcgtcctc
tacttcgagaactacatcgtcaccgaacctggcctcaccgcgctgaaggagcaccagctg
ctcagcgaggaagagtacatgatcgccgtcgacgagtatggcgaggattcgttcaccgcc
atgatcggcgccgaggccattcatgacctcctggccggcatggacctggagaagatcgcc
ggcgacctgcgttcggaactggcgtcgaccacctccgagctgaagcagaagaagtatctg
aagcggctcaaggtcgtcgagaacttcatggaatccggcaatcgtccggaatggatgatc
atgaaggtggttccggtgatcccgccggacctgcgtccgctcgtcccgctggacggcggc
cgtttcgccacgtcggatctgaacgatctctatcgccgcgtcatcaaccgcaacaaccgt
ctgaagcggctgatcgagctgcgcgcccccggcatcatcgtgcgcaatgaaaagcgcatg
ctgcaggaagccgtcgatgcgctgttcgacaacggccgtcgcggccgcgtcatcaccggc
gccaacaagcgcccgctgaagtcgctgtccgacatgctcaagggcaagcagggccgattc
cgtcagaacctgctcggcaagcgcgtcgactattccggccgctcggtcatcgtgaccggt
ccggagctcaagctgcaccagtgcggcctgcccaagaagatggcgctcgaactgttcaag
cccttcatctacgcccgtctcgacgccaagggttactcctcgaccgtcaagcaggcgaag
aagctggtcgaaaaggagcgtccggaagtctgggatatcctcgacgaggtcatccgcgag
catccggtgctgctgaaccgtgcgccgacgctgcaccgtctcggcatccaggcgttcgag
ccgatcctgatcgaaggcaaggcgatccagctgcacccgctggtctgcacggccttcaac
gccgacttcgacggcgatcagatggccgttcacgtgccgctgtcgctggaagcgcagctt
gaagcccgcgtgctgatgatgtcgaccaacaacatcctgcacccggcttccggcgcgccg
atcatcgtgccgtcgcaggacatggttctgggtctctactatctctcgatcgtcaaccag
aacgagccgggcgagggcatggtgtttgccgacatgggcgaactccagcacgcgctcgag
accaaggcggtgacgctgcactccaagatcaagggtcgtttccgcacggtcgacgccgaa
ggcaaggtcgtgtcgaagatccatgacaccacgcctggccgcatgatcatcggcgagctt
ctgccgaagaacgtcaacgtgccttacgagaccgccaaccaggagatgaccaagaagaac
atctccaagatgatcgacaccgtctaccgccattgcggtcagaaggagacggtcattttc
tgcgatcgcatcatggcgctcggcttcagccatgcctgccgtgccggcatttcgttcggc
aaggacgacatgctgatcccggatgccaagatcaagctggtctccgacaccgaggctttg
gccaaggaatacgagcagcagtacaatgacggtctgatcacgcagggcgagaagtacaac
aaggtcgtcgacgcctgggccaagtgctcggaaaaggtcgccgacgagatgatggcccgc
atcaaggcggtcgagttcgaggacaatggccgtcagaagccgatgaactcgatctacatg
atgtcgcactccggtgcgcgtggctcgcccacccagatgcgccagcttgccggcatgcgc
ggccttatggccaagccgtcgggtgaaatcatcgagacgccgatcatctcgaacttcaag
gaaggcctgaccgtgctcgagtacttcaactcgacccacggcgcccgcaagggtctggcc
gacaccgccttgaagacggcgaactcgggttacctcacccgtcgtctggtcgacgtggcg
caggactgcatcgtcaactccgtcgactgcggcaccgacaagggcctcaccatgcagccg
atcgtcgatgccggtcaggtcgttgcttcggtcggccagcgcgtgctgggccgtacgtcg
ctcgacgacatcacccatccggtgtcgggcgagatcctggtcaaggccggaacgctgatg
gacgagcgtgacgtggaacagatcgaaaaggccggcgtccagtcggtccgcatccgctcg
gcactgacttgcgaagtcagggttggcgtctgcgcggtctgctacggtcgcgatctggcc
cgcggcaccccggtcaaccagggcgaagccgtcggcgtcatcgcggcgcagtcgatcggc
gagccgggcacccagctcaccatgcgtaccttccacatgggcggtaccgcgcaggtggtg
gacagctcgttccttgaagcctcgtatgagggcaaggtcgagatccgcaaccgcaacgtg
gtgcgcaactccgacggccagcagatggtcatgggccgcaacatggcggtgctgatcctc
gacgaagccggcaaggagcgcgcctcgcaccgtctcacctatggttcgcgcatcttcgtg
gacgatggtgacaaggtgaagcgcggccagcgtatcgccgagtgggatccctacacgcgt
ccggtcctcaccgaaatcgagggcagggtgtcgtacgaggatctggtcgacggcatttcc
gttcaggaaacggccgacgagtcgaccggcatcaccaagcgtgaggtcatcgactggcgc
tcgacgccacgtggcaacgacctgaagccggcgattgcgatccaggacgccaagggcaag
gtcggcaagctgtccaagggcggcgacgcccgcttcctgctctcggtcgaggccattctt
tcggtcgagccgggttcgcaggttcgccccggcgacgttttggcgcgtattccgatggaa
agcgccaagaccaaggacatcaccggcggtctgccgcgtgttgccgagctgttcgaggca
cgtcgtccgaaggatcacgccatcatcgccgagatcgacggcacgatccgcttcggccgc
gactacaagaacaagcgtcgcatcatcatcgagccgcatgactcgacgcttgagccggtc
gaatacctgatcccgaagggcaagccgttccatctccaggacggcgacgtcatcgagaag
ggcgactacatcctcgacggcaacccggcgccgcacgacatcctggcgatcaagggcgtg
gaggcacttgcttcctacctcgtcaacgagatccaggaagtctaccgtctgcagggcgtg
tcgatcaacgacaagcacatcgaggtgatcgttcgccagatgctgcagaaggtcgagatc
acggtgcagggcgactcgacctacatcccgggcgatcatgtcgacgtgatcgaactggaa
gaggtcaacgagcgtctggtcgaggacggcaagaagccggccgaaggcctgccggtgctg
ctcggcatcaccaaggcatcgctgcagacgccgtccttcatctcggccgcctccttccag
gagacgacgcgagtgctgacggaagctgccgttgccggcaagaccgacatgctgcagggc
ttgaaggaaaacgtcatcgtcggccggttgatcccggccggtaccggcggcacgatgagc
cagatccggcgcatcgccacctcgcgcgacgaactgatcatcgacgagcgccgcaaggcc
tcgggtgcggaagtcgccgagccgatgctggccgacatgaccaccgccgcgcagtaa
DBGET
integrated database retrieval system
