Mesorhizobium ciceri biovar biserrulae: Mesci_3909
Help
Entry
Mesci_3909 CDS
T01401
Name
(GenBank) ErfK/YbiS/YcfS/YnhG family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
mci
Mesorhizobium ciceri biovar biserrulae
Brite
KEGG Orthology (KO) [BR:
mci00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mci01002
]
Mesci_3909
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
mci01011
]
Mesci_3909
Peptidases and inhibitors [BR:
mci01002
]
Cysteine peptidases
Family C82
Mesci_3909
Peptidoglycan biosynthesis and degradation proteins [BR:
mci01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
Mesci_3909
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Scaffold
YkuD
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
ADV13025
UniProt:
E8T8X7
LinkDB
All DBs
Position
complement(4043040..4044929)
Genome browser
AA seq
629 aa
AA seq
DB search
MKFLGNKATVMPLMAITATLAFGVPQAGAQGLFDMLFGGGVRHAPKGEFPPPPPKNKPKP
KVSGGGGGNVKISSPSYYTYKADRLVRVDFSALAATPAPATPQDAAFVPSATGAAFRDAV
ASLGDYELLAEPDIAKALIAYYSANPDFIWISGTSLNSRAQDAVRVLGEASSYGLTPADY
TVEVPAAGASTTDANAQLKELVRFEMSLSARVLRYAHDAQNGRVDPNRMTGYYDFPAKPL
DLQGVLKTLAHTQQVRTYLESRHPQNAEYQALRVELEALQASAENEIVVDPKLLLKPGET
SPELPKLLTLIARNLDDEMGGAYGEVLSRLATSDVYDPELVPVIKAVQQKAGMKGDGVIG
PRTVASLAGTSKADKLLKVEVALEELRWLPSDLGSPRVFINQPAFTASYIDNGEEKLRTR
VVVGRTTNQTSFFYDQIKQVDFHPYWGVPQSIIVNEMLPRLRNDPGYLDRAGYEVTDSRG
KRIPSSAVNWGAYGSNIPYSVRQQPSEANALGELKILFPNKHAIYMHDTPQKSFFQRDMR
ALSHGCVRLQDPRGMAAAVLGTSVDYIAEKLKHGHATENVTRTIPVYVAYFTAWPDLSGK
VEYFGDVYDRDSRLKQALDVTEAVRSPSS
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgaaattcctcggaaacaaagcaaccgtgatgccgctgatggcaatcacggcgacgctg
gctttcggtgtaccccaggcaggcgcgcaggggctcttcgacatgcttttcggcggcggc
gtcaggcatgcgccgaaaggcgagtttccgcccccgccaccgaagaacaagccaaagccg
aaagtgtccggtggcggcggcggcaatgtgaagatcagcagcccgtcctactacacctac
aaggccgaccggctggttcgcgtcgacttctcggcattggccgcgacgccggcgccggcg
acaccgcaggacgccgccttcgtcccgtcggctacgggtgccgcctttcgtgatgcggtt
gccagcttgggcgactacgaactcttagccgagcccgacatcgccaaggcgctgatcgcg
tactactcggccaatccggatttcatctggataagcggaaccagcctcaacagccgtgcg
caggatgcggtgcgggtgcttggcgaggcttcaagctatggcctcacgcccgccgactat
acggtcgaagtgcccgctgccggcgcatcgacgaccgacgccaatgcgcaactgaaagaa
ctcgtccgtttcgagatgtcgctttcggcgcgtgtgctgcgctatgcccacgacgcccag
aacggccgcgtcgatcccaaccgcatgaccggctattatgatttcccggccaagccgctc
gatctgcaaggcgtgctgaaaacgctggctcatacccagcaggtgcgcacctatctcgaa
tcgcggcacccgcagaatgcggaataccaggcgctgcgcgtcgaactggaagcgctgcag
gccagtgcggaaaacgaaatcgtcgtcgaccccaaactgctgctgaagccgggcgaaacc
agccccgagctgccgaagctgctgaccctgatcgcgcgcaatctcgacgacgagatgggc
ggcgcctatggcgaggtcctgtcaaggctggccaccagcgacgtctatgatccggaattg
gttccggttatcaaggccgtgcagcagaaggcaggcatgaagggcgacggcgtcatcggc
ccgcgcaccgtcgcgtcgctggccggaacatccaaggccgacaagctgctgaaggtggaa
gtggcgctggaggaactgcgctggctgccctccgatctcggcagcccgcgcgtcttcatc
aaccagccggccttcaccgcgagctacatcgacaatggcgaggaaaagctcaggacgcgt
gtcgtcgttggccggaccaccaaccagacctccttcttctacgaccagatcaagcaggtc
gatttccatccctattggggcgtgccccagtcgatcatcgtcaacgagatgctgccgaga
ttgcgcaacgatccgggctatctcgaccgggccggctatgaggtgacggattcgcgcggc
aagcgcattccttcgtcggcggtcaactggggcgcctatggctcgaacatcccatacagc
gtgcgccagcagccgagcgaggccaacgcgctgggcgagttgaagatcctgttccccaac
aagcatgcgatctacatgcacgacacgccacagaaatcgttcttccagcgcgatatgcgc
gcgctcagccatggctgcgtgcggctgcaggatccgcgcggcatggcggcggcggtgctt
ggcacctccgtggactatatcgccgaaaagctgaagcacggccacgcgaccgagaacgtg
acacgcacgatcccggtctatgtcgcctatttcaccgcctggcccgatctgtcgggcaag
gtcgaatatttcggcgacgtctacgaccgcgactcgcggctgaagcaggccctggatgtc
acggaggcggttcgctcgccttcgagttga
DBGET
integrated database retrieval system
