Mesorhizobium ciceri biovar biserrulae: Mesci_4211
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Entry
Mesci_4211 CDS
T01401
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
mci
Mesorhizobium ciceri biovar biserrulae
Pathway
mci03410
Base excision repair
mci03430
Mismatch repair
mci03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mci00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Mesci_4211
03430 Mismatch repair
Mesci_4211
03440 Homologous recombination
Mesci_4211
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mci03400
]
Mesci_4211
DNA repair and recombination proteins [BR:
mci03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
Mesci_4211
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Mesci_4211
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Mesci_4211
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
DUF2214
Motif
Other DBs
NCBI-ProteinID:
ADV13322
UniProt:
E8TD74
LinkDB
All DBs
Position
complement(4355173..4356957)
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AA seq
594 aa
AA seq
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MTGEKRLFLDVRQSVSGVSWEHRLTERQDMIALAIAQGYGVPDIVARVLAGRGVTAEQTE
RFLDPTIRDLLPDPASLTDMDRAAARIAAAVMAREKVAIFGDYDVDGAASSALLKRFLTH
FSVPSEIYIPDRIFEGYGPNPDAMRELVSRGATLIVTVDCGTNSAASIDAANEAGADVVV
LDHHQVGGALPAAIAVVNPNRDDDLSGQGHLCAAGVVFLALVQTARILRSRMADATPPDL
LSLLDIVALATVCDVVPLTGVNRAFVVKGLQMARQQKNEGLAALARVSRIGEPISTFHLA
YLIGPRINAGGRIGDAALGSRLLATDDPVEARTIAETLDRLNQERQLMEQEMLAAARAEA
DAELAGGNGPAIVVTASNSWHPGIVGLLASRLKDHARRPAFAIAFNANGIGTGSGRSVSG
FDLGRLVREAAIAGLIVKGGGHGMAAGITVERARLGELRAFFEERAAADVFRLQGEESLA
IDGALAAEGATLSLLDALEQAGPFGAGHVAPVFALPRHRLADARPVGTNHIRVELQSESG
GRIQAIAFRAVDTALGEFLFKNRGKTIHVAGSLSGNYWNGNRTVQFRITDAARA
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgaccggcgaaaagcgcctcttcctcgatgtcaggcagtcggtgtcaggggtttcctgg
gagcaccggctgaccgagcggcaggacatgatcgcgctcgccatcgcgcaaggctacggg
gtacccgatatcgtagcacgggtgcttgccggccgcggcgtcaccgccgagcagaccgag
cggtttctcgatccgacgatccgcgatcttctgccggatccggcatcgctgaccgacatg
gacagggcggcggcccggatcgccgccgcggtgatggccagggaaaaggtggcgatcttc
ggcgactatgatgtcgacggcgccgcctcgtcggccttgctgaagcggttcctcacgcat
ttctcggtgccgtcggaaatctacatcccggatcgtattttcgagggctatggccccaac
cctgacgccatgcgcgaacttgtttcgcgtggcgcgacactgatcgtcaccgtcgattgc
ggcaccaacagcgccgcctccatcgatgccgccaatgaggccggggccgatgtcgtggtg
ctcgaccaccaccaggtcggcggtgccttgccggcggcaatcgctgtcgtcaatcccaat
cgcgacgacgacctctccgggcagggccatctctgtgccgccggcgtggtcttcctcgcc
cttgtgcagacggccaggatcctgcgtagccgcatggccgatgctacgccgccggacctg
ctttcgctgctcgatatcgtggcattggccaccgtttgtgacgtggtgccgctgaccggc
gtcaaccgtgccttcgtggtcaaggggctgcagatggcgcgccagcagaagaacgaaggg
ctcgcggcactggcacgggtgtcgcgcatcggcgagccgatcagcactttccatctggcc
tatctgatcggcccgcgcatcaatgccggcggacgcatcggcgatgccgcacttggcagc
cggttgcttgcgaccgacgacccggtcgaggcgcgcaccattgccgagacgctcgaccgg
ctcaaccaggaacggcagttgatggagcaggagatgctcgcggcggcgcgcgccgaggcc
gatgcggagctcgccggcggcaatggcccggcgatcgtcgtcaccgccagcaacagctgg
catccgggcatcgtcggtttgctcgcctcacggctgaaggatcatgcccgccggccggcc
ttcgccatcgccttcaacgccaacggcatcggcaccggctcgggccgctcggtctcgggg
ttcgacctcggccggctggtgcgcgaggcggccattgccggtctgatcgtcaagggtggc
gggcatggcatggcggcgggcatcaccgtcgagcgggcgaggcttggtgagctcagggcg
tttttcgaagagcgggcggcagccgatgtgtttcgcctgcagggcgaggaaagcctggcc
atagacggtgcgcttgccgctgaaggcgcgacactcagcctgctcgacgcgctggaacaa
gccggacctttcggtgccgggcacgtggcccctgttttcgcgttgccgcgccaccggttg
gccgatgcgcggccggtcggcaccaatcacatccgcgtcgagctgcaatcggaaagcggc
ggccggatccaggcgatcgcctttcgcgccgtcgataccgcgcttggcgaattcctgttc
aagaaccggggcaagacaatccacgtcgccggttcgctctcagggaattactggaacggc
aaccgcaccgttcagtttcgtatcaccgatgcggctcgtgcgtag
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