Mesorhizobium ciceri biovar biserrulae: Mesci_4513
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Entry
Mesci_4513 CDS
T01401
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
mci
Mesorhizobium ciceri biovar biserrulae
Brite
KEGG Orthology (KO) [BR:
mci00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mci03016
]
Mesci_4513
Enzymes [BR:
mci01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
Mesci_4513
Transfer RNA biogenesis [BR:
mci03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
Mesci_4513
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
RNAseD_HRDC_C
Motif
Other DBs
NCBI-ProteinID:
ADV13623
UniProt:
E8THH7
LinkDB
All DBs
Position
4639567..4640718
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AA seq
383 aa
AA seq
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MHVITTQKELETVLAAFEKSDFVTVDTEFIRETTFWPILCLIQMAAPGVTALIDPLAPDI
DLKPFFRLMANEAVVKVFHAARQDIEIIVHLGDLVPHPVFDTQVAAMVCGFGDSVSYDQL
VQRITGARLDKSSRFTDWRHRPLSDKQLDYALADVTHLIEVYQHLSAELERENRAHWLNE
EMEVLTSRETYDPHPEDAWKRLKMRLRKPQELAIVQGVAAWREREARERDVPRGRVLKDD
AIYEVAQQAPRDAAALGKLRTTPKGWERSSTATALLGAVNTALALPKEQMPKLPKSFQPP
EGSSAAAELLKVLLRIVAEKEGVASKVLASSDDIDRIAAEGEDADVPALQGWRRAVFGEA
ALKLVRGEIGIKFDKRKIAVFDL
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgcacgtcatcaccacccagaaagaactcgagaccgttctcgccgctttcgaaaagtcg
gatttcgtcactgtcgacaccgaattcattcgagaaacgacgttttggccgatcctgtgc
ctgatccagatggccgcccctggcgtaacggcactgatcgatccgctggctcccgatatc
gacctgaagccgttcttcaggctgatggccaacgaagctgtggtcaaagtcttccacgcc
gcgcggcaggacatcgaaatcatcgtccatctcggcgatctggttccgcatccagtgttc
gacacgcaagtggcggcaatggtctgcggcttcggcgacagcgtatcctacgatcagctc
gtgcagcgcatcaccggggcgcggctcgacaagtcgtcgcgcttcaccgactggcgccac
cggccgctttccgacaagcagctcgactatgcgctggccgacgtcacccatctgatcgag
gtctatcagcacctcagcgccgaactggagcgggaaaaccgcgcccattggcttaacgag
gaaatggaggtccttacctcccgcgaaacctatgatccgcatcccgaggacgcctggaag
cgtctgaagatgcggctgcgcaagccgcaggagttggcgatcgtgcaaggcgttgcggcg
tggcgcgagcgcgaggcgcgcgaacgcgacgtgccgcgcggccgcgtgctcaaggacgat
gcgatctacgaggtggcgcaacaggcgccgcgcgacgcggcagccctgggcaagctgcgc
acgacgccgaagggctgggaacgctcctcgacggcgacggcgctgcttggcgcggtcaac
accgcccttgccctgcccaaggagcagatgccgaaactgccgaagagtttccagccgccc
gagggctcgagcgccgcggcggaactgttgaaggtgctgctgcggatcgtcgccgaaaag
gaaggcgtcgcctccaaggtgctggcctccagcgacgacatcgaccgtatcgccgccgag
ggcgaggacgccgacgtaccggccctgcagggctggcggcgcgcggttttcggcgaggcc
gcgctcaagctggtgcgcggcgagatcggcatcaagttcgacaagcgcaagattgcggtg
ttcgacctgtag
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