Mesorhizobium ciceri biovar biserrulae: Mesci_5855
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Entry
Mesci_5855 CDS
T01401
Name
(GenBank) LysR substrate-binding protein
KO
K14657
LysR family transcriptional regulator, nod-box dependent transcriptional activator
Organism
mci
Mesorhizobium ciceri biovar biserrulae
Module
mci_M00664
Nodulation
Brite
KEGG Orthology (KO) [BR:
mci00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mci03000
]
Mesci_5855
Transcription factors [BR:
mci03000
]
Prokaryotic type
Helix-turn-helix
LysR family
Mesci_5855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
Motif
Other DBs
NCBI-ProteinID:
ADV14877
UniProt:
E8TIS2
LinkDB
All DBs
Position
complement(6058699..6059616)
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AA seq
305 aa
AA seq
DB search
MRFRGLDLNLLVVLDALLAERNLSAAARRINLSQPAMSAAVARLRDFFGDELFSMNGRER
ILTSRAAALGPAVRDALLHIQRTIISSDPFDPARSDRRFRITISDFATLVFFEKVVERVA
REAPAVSFELLPVNDSPDELLGRGDVDFVVLPDLFTSSAHSSVALFDERLVCVGCPTNRQ
LRRQLTFERYLSMRHVSVRFGRSLMPSVEEWFLLEHGLKRRVEVAVQGFSMIPPMVSGTA
RIATMPFRLVKYFEKTFPLQIVELPLPLPAFTEAVQWPALHNTDPASVWMREVMIQEAAR
MAVPL
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgcgtttcagggggcttgatctcaatcttctcgtcgtgctggacgcattgctggccgag
cgcaatctctcggcggcggcacgccggatcaatctcagtcagccggcgatgagtgcggcc
gtcgcccgactgcgcgattttttcggcgatgaactgttcagcatgaacggccgcgaacgt
attctgacgtcacgtgcggcagcacttggccccgcagtccgcgacgctctgctgcacatc
caacgtacgattatttcttccgatccgtttgacccggctcgatccgatcgtcgcttcagg
atcactatttccgatttcgccacgctcgttttttttgagaaagtcgtggaacgtgttgcc
cgggaagcccccgccgtcagtttcgaattgctgcctgtcaacgatagccccgatgagctc
ctcgggcgcggcgacgtcgattttgtagttcttccagatttgttcacgtcgagcgcgcat
tcgagcgtggccttgttcgacgagaggctcgtatgcgtcggctgtcccacgaacaggcag
ctgagacggcagcttacattcgagagatacctgtcgatgaggcacgtctcggtcaggttc
ggacgttcgctgatgccgtccgtcgaggaatggttcttactcgagcatggtcttaaaaga
cgtgtcgaggtggccgtgcagggcttcagcatgatcccacccatggtgtccggcacggct
cgtattgcgaccatgcccttccggctggttaagtacttcgaaaaaaccttcccccttcag
attgtggaacttccgctgccgcttcctgctttcaccgaagcggtccaatggccagcactc
cataataccgatccggcaagcgtctggatgcgcgaggtaatgatacaggaggcagctcgc
atggctgttccgctgtga
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