Mesorhizobium ciceri biovar biserrulae: Mesci_5899
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Entry
Mesci_5899 CDS
T01401
Name
(GenBank) peptidase C14 caspase catalytic subunit p20
KO
K03726
ATP-dependent DNA helicase [EC:
5.6.2.4
]
Organism
mci
Mesorhizobium ciceri biovar biserrulae
Brite
KEGG Orthology (KO) [BR:
mci00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mci03400
]
Mesci_5899
Enzymes [BR:
mci01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Mesci_5899
DNA repair and recombination proteins [BR:
mci03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
Mesci_5899
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Peptidase_C14
Helicase_C
ResIII
Helicase_dom4_arc
HemN_C
DEXQc_Suv3
Peptidase_C13
Motif
Other DBs
NCBI-ProteinID:
ADV14912
UniProt:
E8TJQ1
LinkDB
All DBs
Position
complement(6103529..6106540)
Genome browser
AA seq
1003 aa
AA seq
DB search
MIRAAFIGINKHLDPLARELSGAVGDASTLCAVLSDSIDRFQPTLITDHDATYARVSAIF
DDVLDGASEDDVVILFFAGHGTQDHRLVLTDTRSDDVPGTTIDMTEIAAKFRTSRARAVL
LLLDCCFSGGAPARVLDVGYIPRAAGMPLAEVGGQGRILFAACNPNEEALEDPQTRHGLF
TKAILDCILESDGPVSVVAMVDRVVQMVRANAARFGYEQTPVMFGHVEGELTLPKGMRGE
CYRALYPERGTVTVTGPIGELSAYGIPQNALNAWSDRFPAGLNSLQIAAVNSHGVLDGKS
LLVVAPTSAGKTFVGEMAALKAIGEGKKAVFLLPYKALVNEKFEDFSALYGDLLNLRIAR
CSGDWQDQVGDVLRGKYDIAFFTYEKFLALSVSSPHILHQIGLVVIDEGQFITEPGRGMV
VELILTNLLSARERGIAPQLATLSAVIGDTNNFERWLDCELLLTTERPVPLTEGVIDRSG
VWKLQRPNGEVEVAQLFARCEIRQRRDKPSSQDVLVPLVRHLAGQGEKVIVFRNARGPSA
GCAEYLAAELGLPPAQAIADMLPGMDRSDMSERLRRALNGGVAFHNGDLNREERMIVERG
FRDPNGGIQVLVATSTVAAGVNTPASTVIVAETEFRGVEPQPYTVAQYKNMAGRAGRLGY
ETEGKAIVLADTGMERENLFRRYVQGSPERIQSSFDERSPGTWVVRLLAQVKDIPSNAVV
DLVANTYGGFVASLRDPAWRGSMSTRLLNLMTRMQHDGLIDERDGRLRLTPLGRACGESP
LSLESSMQAVELLRQLPPDSIGLETVLVLLEALPERDEDYTPQTRRGEPQRQQQVSQRFG
QHVARALWHRAESDVKYYGRCKRALIVSDWIEGVTITDIETGYTTNPFSPIRHGDIRGFA
DGTRFLLDSVLRIAAIVLGRADDPDEVSTLLKRLDLGIPGAAFSLTELPIVLARGEILEL
WRNGYGSREQVEHATEAELVSLLNARGNMLYAALHEELAITGS
NT seq
3012 nt
NT seq
+upstream
nt +downstream
nt
atgatccgcgcagcgtttattggaatcaacaaacatcttgatccgcttgcgcgggaactg
agcggcgctgtgggtgatgcttcgactttgtgcgcggtgctgtcggattctattgaccgg
tttcagccaacgcttatcactgaccacgacgcgacttatgcgagggtttcggccatcttt
gacgatgtgctcgacggtgcatcagaagatgacgtcgtcatcctgttttttgccggccac
ggcacgcaagaccaccgattagttttgacggatacgcgctctgacgacgttccgggaacg
acaatagacatgacggagattgccgcgaagtttcggacttcgcgagcgcgcgctgtcctg
cttttgctagattgctgctttagcggtggcgcgccggcacgcgttctggatgtcggatac
attccgcgcgcagcggggatgccgctcgccgaagttggtggacagggccgtattcttttc
gctgcatgcaatccaaacgaggaggccctcgaagacccccaaacacgccacggtcttttt
acgaaggcgattttggattgcatactggagagtgatggaccggtgagcgtggttgcgatg
gtggaccgcgttgtgcaaatggtccgcgccaacgctgcccgattcggttacgaacagact
ccggtgatgttcggtcatgtcgaaggagagctaaccctgccgaaaggtatgcgcggtgaa
tgctaccgcgcgctctatccagaaagaggcacggtcactgttacaggtccaattggggag
ctttcggcctacggaattcctcagaatgcgctgaacgcttggagcgatcgtttccccgcc
ggtctgaattcattgcagatcgccgctgtgaatagccatggcgtgctcgatggaaaatct
cttctcgtcgtagcgccgacaagtgccggcaaaacgtttgtcggcgagatggcagcactg
aaagcaatcggcgagggaaagaaggcggttttcctcctcccttacaaagcgctggtcaat
gaaaaattcgaagatttctctgcgctctatggcgaccttttgaatctgcgcatcgcccga
tgcagcggcgattggcaagatcaggttggcgacgttctaaggggtaagtacgacatagcc
ttcttcacttacgagaagtttttggctctgtcagtttcctctccacacatccttcaccaa
atcggtcttgtggtgattgacgaaggacagtttatcacagagccgggtcgtgggatggtt
gtggagctaatcctcaccaatcttttgagtgcacgcgagcgggggattgcacctcagttg
gcgaccctgagtgcggtaatcggcgacacaaacaactttgagcgctggcttgattgcgaa
cttctccttacgaccgagcgtccggttcccttgacagaaggtgtcattgatcggagcggc
gtgtggaagttgcagcgtcctaatggtgaggtggaggtcgcgcagttgttcgcacgctgc
gagatacggcagcgccgggataagccatcttcccaagacgttctcgtaccgctggttcgg
catctcgccggtcagggcgaaaaggtcatcgtctttcgtaacgcgagaggaccatccgcc
ggttgcgcggaatatctcgcggccgagttgggtttgccgccagcacaagcaatcgcggac
atgctgccgggaatggatcgttcggatatgtccgaacgccttcgccgcgcgctcaacggc
ggcgttgcctttcacaacggtgatcttaatcgcgaagaacgcatgatcgtggagagaggc
tttcgcgatccaaacggtgggattcaggtcttggtggcgacaagcaccgtagctgccggc
gtaaacacgccggcttcgaccgtcatcgtggccgaaacggaatttcgcggagtggagccg
cagccttacactgtcgctcagtataagaacatggcgggccgtgcaggtcgcctaggctac
gagacagaaggcaaagccatagttctcgccgacaccggcatggagcgagagaatctcttc
cggcgctacgttcagggaagtcccgaacgcatccagtcttccttcgacgaaagaagcccg
ggcacgtgggtcgttagacttctggcgcaggtaaaggatattccaagcaatgcggttgtc
gatctggtggcaaacacctatggaggatttgttgcctcgctgagagatcccgcctggcgc
ggcagcatgtcaacccggctcctcaatttgatgacgaggatgcagcacgatgggttgatt
gatgagcgcgatggaaggctgaggctaacgcctctagggcgcgcctgcggcgagtcaccc
ctcagcttggaatccagtatgcaggctgttgagctgctacgccaattgccgccggattcg
atagggctagagacggttctcgttttattggaagcactgcccgaacgcgatgaagactac
acgcctcaaacaagacgcggtgagccgcaacggcagcaacaagtttcgcaacgctttggc
caacatgtggcgcgtgccctatggcatcgtgcggaaagcgatgtgaaatattacggtcgc
tgcaaacgtgcgctcatcgtttcggactggatcgaaggcgttacaatcacggatattgag
actggctacaccaccaatccgttttcgcccattcgtcatggcgacataaggggttttgct
gacggtacccgcttcctgttggactcggtgctccgaatagctgcgatcgttcttggtcga
gctgatgatccggatgaggtgagtactttgcttaaacgccttgaccttggaatacccggc
gcagccttctccttgactgaattacctatcgtcttagcgcgcggcgaaatcctcgagttg
tggagaaacggatatggaagtcgagagcaagtcgaacatgcaaccgaagccgaactcgta
tccttgttgaacgcgagagggaatatgttgtacgccgcattgcacgaggaacttgctatc
actgggtcctga
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integrated database retrieval system
