Mesorhizobium ciceri CC1192: A4R28_03600
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Entry
A4R28_03600 CDS
T08712
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mcic
Mesorhizobium ciceri CC1192
Pathway
mcic03420
Nucleotide excision repair
mcic03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mcic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
A4R28_03600
03430 Mismatch repair
A4R28_03600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mcic03400
]
A4R28_03600
Enzymes [BR:
mcic01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
A4R28_03600
DNA repair and recombination proteins [BR:
mcic03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
A4R28_03600
MMR (mismatch excision repair)
Other MMR factors
A4R28_03600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_12
DEAD
Motif
Other DBs
NCBI-ProteinID:
AMX92267
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All DBs
Position
786617..788710
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AA seq
697 aa
AA seq
DB search
MNLATADSTFREPTVQPAYLARLNDAQRQAVEHGAGQIAGPLLVIAGAGSGKTNTLAHRV
AHLIVKGADPRRILLMTFSRRAASEMARRVERIAGEVLGRDAAVITDALTWAGTFHGIGA
RLLRDYALEIGLDPAFTIHDREDSADLMNLVRHELGFSKTEARFPTKGTCLAIYSRAVNA
QAPLNEVLGSAFPWCAGWAEQLKELFAGYVEAKQAQNVLDYDDLLLYWAQMAAEPEIAAH
LGGRFDHVLVDEYQDTNRLQASILMALKPDGAGLTVVGDDAQSIYSFRAAEVRNILDFPN
QFAQAADVVMLERNYRSTETILAAANAVIGEASERFTKNLWSERKSSDRPKLVTVRDEVE
QANFVCDTILAEREAGTALKSQAVLFRASHHSGPLEIELTRRNIPFVKFGGLKFLDAAHV
KDVLAVLRFAENPRDRVAGFRVLQLLPGIGPSAAAQIVETMTTALDEAMGLAGWRPPQRA
ADDWPGFVALYSGLRAGARWPADLEQIRLWYEPHLERIHEDATTRRADLLQLEQIGSGYA
SRERFLTELTLDPPDATSDQAGPPHRDEDYLILSTIHSAKGQEWKNVFVLNTVDGCIPAD
LGVGTKEDIEEERRLLYVAMTRAKDNLNLVMPQRFFPHGQAARGDRHLYASRTRFIPASI
LAAFEQMSWPSALAAQGRAARPEVRVDIGARMRGMWK
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgaacctcgccaccgctgattcgacctttcgggaaccgaccgtccagcctgcctatctc
gcgcggctgaacgatgcccagcgccaggccgtcgagcacggcgccggtcagattgccggc
ccgttgctggtcattgccggcgccggatctggcaagaccaacacgctggcgcatcgcgtc
gctcatctgatcgtcaagggcgccgacccgcgccgcatcctgctgatgacgttttcgcgc
cgcgcggcatccgaaatggccaggcgcgtcgagcgtattgccggcgaggtgctcggccgc
gatgcagccgtcatcaccgatgcgctgacctgggccggcacctttcacggcatcggcgcg
cggctgttgcgcgactatgcgctggagatcggtctcgacccggccttcaccatccatgat
cgcgaggattccgccgacctgatgaatctggtccgccacgaactcggcttctcgaagacg
gaagcgcgtttccccaccaagggcacttgccttgccatctattcgcgcgcggtgaacgcg
caggcgccgctcaacgaggtgttgggttccgcctttccctggtgcgccggctgggcggag
cagctgaaagaattgttcgccggttatgtcgaggccaagcaggcgcaaaacgtgctcgat
tacgacgatttgctgctctactgggcgcagatggcggcggagcccgagatagcggcgcat
ctgggcgggcgtttcgaccatgtgctggtcgacgaataccaggacacaaatcgcctgcag
gcttcgatcctcatggcgctgaaacccgacggcgccgggctgacggtggtgggcgacgat
gcgcaatcgatctattcgttccgcgccgccgaggttcgcaacatcctcgacttccccaat
cagttcgcgcaagccgccgacgtggtgatgctggagcgcaattaccgctcgaccgagacc
atccttgctgccgccaacgcggtgatcggcgaagcctcggagcgcttcaccaaaaacctg
tggtcggagcgcaaatccagcgacaggccaaaactggtgaccgtgcgcgacgaagtcgag
caggccaatttcgtctgcgacaccatcctggccgagcgcgaggcgggcacagcgctgaaa
tcccaggcggtgctgtttcgcgcctcgcatcacagcgggccgctggagatcgaactgacg
cggcgcaacattcccttcgtcaaattcggcggcctgaagtttctcgatgccgcccacgtc
aaggatgtgctggcggtgctgcgctttgccgaaaacccgcgcgaccgggtcgccggtttt
cgcgtattgcaactcttgcctggcatcggcccttcggccgccgcgcagatcgtcgagacc
atgacgacggcgctggacgaggccatggggctggccggctggcgtccgccgcaacgcgcg
gcggacgactggcctggcttcgtcgcgctctattccggcctgcgcgccggcgccagatgg
ccggccgacctcgaacagatcaggctgtggtacgagccgcatctggaacgcatccacgag
gacgcgacgacgcgccgggccgacctgttgcaacttgagcagatcggctcgggctatgcc
tcgcgcgagcgcttcctgaccgaactgacgctcgatccgccggacgccaccagcgaccag
gctgggccgccgcatcgcgacgaggattatctgatcctgtcgaccatccactcggccaag
ggccaggagtggaaaaatgtcttcgtgctcaacaccgtcgatggctgcatcccggccgat
ctcggcgtcggcaccaaggaggacatcgaggaggagcgccggctgctctatgtcgcgatg
acacgggccaaggacaatctcaacctggtcatgccgcagcgtttctttccacatggccag
gcggcgcgcggcgaccgccatctctatgcctcgcgcacccgtttcatcccggcctcgatc
ctcgccgcgttcgaacagatgtcgtggccaagcgcgctggccgcgcagggcagggcggcc
cggccggaggtgcgcgtcgacattggcgcccgtatgcgcggcatgtggaaatag
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