Mesorhizobium ciceri CC1192: A4R28_05995
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Entry
A4R28_05995 CDS
T08712
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
mcic
Mesorhizobium ciceri CC1192
Pathway
mcic03410
Base excision repair
mcic03430
Mismatch repair
mcic03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mcic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
A4R28_05995
03430 Mismatch repair
A4R28_05995
03440 Homologous recombination
A4R28_05995
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mcic03400
]
A4R28_05995
DNA repair and recombination proteins [BR:
mcic03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
A4R28_05995
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
A4R28_05995
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
A4R28_05995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
DUF2214
Motif
Other DBs
NCBI-ProteinID:
AMX92683
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Position
1253040..1254824
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AA seq
594 aa
AA seq
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MTGEKRLFLDVRQSVSGVSWEHRLTERQDMIALAIAQGYGVPDIVARVLAGRGVTAEQTE
RFLDPTIRDLLPDPASLTDMHRAAARIAAAVMAREKVAIFGDYDVDGAASSALLKRFLTH
FSVPSEIYIPDRIFEGYGPNPDAMRELVSRGATLIVTVDCGTNSAASIDAANEAGADVVV
LDHHQVGGALPAAIAVVNPNRDDDLSGQGHLCAAGVVFLALVQTARILRSRMADATPPDL
LSLLDIVALATVCDVVPLTGVNRAFVVKGLQMARQQKNEGLAALARVSRIGEPISTFHLA
YLIGPRINAGGRIGDAALGSRLLATDDPVEARTIAETLDRLNQERQLMEQEMLAAARAEA
DAELAGGNGPAIVVTASNSWHPGIVGLLASRLKDHARRPAFAIAFNANGIGTGSGRSVSG
FDLGRLVREAAIAGLIVKGGGHGMAAGITVERARLGELRAFFEERAAADVFRLQGEESLA
IDGALAAEGATLSLLDALEQAGPFGAGHVAPVFALPRHRLADARPVGTNHIRVELQSESG
GRIQAIAFRAVDTALGEFLFKNRGKTIHVAGSLSGNYWNGNRTVQFRITDAARA
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgaccggcgaaaagcgcctcttcctcgatgtcaggcagtcggtatcaggggtttcctgg
gagcaccggctgaccgagcggcaggacatgatcgcgctcgccatcgcgcaaggctacggg
gtacccgatatcgtagcacgggtgcttgccggccgcggcgtcaccgccgagcagaccgag
cggtttctcgatccgacgatccgcgatcttctgccggatccggcatcgctgaccgacatg
cacagggcggcggcccggatcgccgccgcggtgatggccagggaaaaggtggcgatcttc
ggcgactatgatgtcgacggcgccgcctcgtcggccttgctgaagcggttcctcacgcat
ttctcggtgccgtcggaaatctacatcccggatcgtattttcgagggctatggccccaac
cccgacgccatgcgcgaacttgtttcgcgtggcgcgacactgatcgtcaccgtcgattgc
ggcaccaacagcgccgcttccatcgatgccgccaatgaggccggggccgatgtcgtggtg
ctcgaccaccaccaggtcggcggtgccttgccggcggcaatcgctgtcgtcaatcccaat
cgcgacgacgacctttccgggcagggccatctctgtgccgccggcgtggtcttcctcgcc
cttgtgcagacggccaggatcctgcgtagccgcatggccgatgctacgccgccggacctg
ctttcgctgctcgatatcgtggcattggccaccgtttgtgacgtggtgccgctgaccggc
gtcaaccgtgccttcgtggtcaaggggctgcagatggcgcgccagcagaagaacgaaggg
ctcgcggcactggcacgggtgtcgcgcatcggcgagccgatcagcaccttccatctggcc
tatctgatcggcccgcgcatcaatgccggcggacgcatcggcgatgccgcacttggcagc
cggttgcttgcgaccgacgacccggtcgaggcgcgcaccattgccgagacgctcgaccgg
ctcaaccaggaacggcagctgatggagcaggagatgctcgcggcggcgcgcgccgaggcc
gatgcggagctcgccggcggcaatggcccggctatcgtcgtcaccgccagcaacagctgg
catccgggcatcgtcggtttgctcgcctcacggctgaaggatcatgcccgccggcccgcc
ttcgccatcgccttcaacgccaacggcatcggcaccggctcgggccgctcggtctcgggt
ttcgacctcggccggctggtgcgcgaggcggcgattgccggtctgatcgtcaagggtggc
gggcatggcatggcggcgggcatcaccgtcgagcgggcgaggcttggtgagctcagggcg
tttttcgaagagcgggcggcagccgacgtgtttcgcctgcagggcgaggaaagcctggcc
atagacggtgcgcttgccgctgaaggcgcgacactcagcctactcgacgcgctggaacaa
gccggacctttcggtgccgggcacgtggcccctgttttcgcgttgccgcgccaccggttg
gccgatgcgcggccggtcggcaccaatcacatccgcgtcgagctgcaatcggaaagcggc
ggccggatccaggcgatcgcctttcgcgccgtcgataccgcgcttggcgaattcctgttc
aagaaccggggcaagacaatccacgtcgccggttcgctgtcgggaaattactggaacggc
aaccgcaccgttcagtttcgtatcaccgatgcggctcgtgcgtag
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