Mesorhizobium ciceri CC1192: A4R28_06220
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Entry
A4R28_06220 CDS
T08712
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
mcic
Mesorhizobium ciceri CC1192
Pathway
mcic03030
DNA replication
mcic03430
Mismatch repair
mcic03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mcic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
A4R28_06220
03430 Mismatch repair
A4R28_06220
03440 Homologous recombination
A4R28_06220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mcic03032
]
A4R28_06220
03400 DNA repair and recombination proteins [BR:
mcic03400
]
A4R28_06220
Enzymes [BR:
mcic01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
A4R28_06220
DNA replication proteins [BR:
mcic03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
A4R28_06220
DNA repair and recombination proteins [BR:
mcic03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
A4R28_06220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
T2SSK
Motif
Other DBs
NCBI-ProteinID:
AMX92722
LinkDB
All DBs
Position
1300940..1304467
Genome browser
AA seq
1175 aa
AA seq
DB search
MADEKLPRDPLKREAAIAAARPEAPARPFVHLLVHSAYSLLEGALQIGKVVAHAVKDEAP
AIAVTDTNNLFGALEFAQKAVKDGIQPIIGCQTALAFSGENSDGQRDRRRQGPDMRPVVL
LAATEAGYSNLVRLVSRVYLETPPGEAVHLTTEMMEGYCDGLICLSGGPRGPIGTALKED
RRDLAEARLLTLKEMFGDRLYVELDRVSGYDRVIEKSSIDLAYAHELPLVATNEAFFSSR
DDYDAHDALIAIAEGSVVAADNRRRLSPDNFLRSQADMARLFADLPEAIDNTVEIALRCS
YYPKNRNPILPRFTGGDVADNDAAVQAEADELARQAHEGLDARLAMHGPTAGYTVEQYRE
RLNFELGIITKMKFPGYFLIVADFIKWAKAQGIPVGPGRGSGAGSLVAYSTTITDIDPLR
FSLLFERFLNPDRVSMPDFDIDFCQDRREEVIRYVQQKYGRDQVGQIITFGTLQARAVLR
DVGRVLQMPYGQVDKLSKMVPQNPANPVKLADAIANEPRFAEEAEREPIVQTLLDMAQKL
EGLYRHASTHAAGIVIGDRPLSELVPMYRDPRSDMPVTQFNMKYVEQAGLVKFDFLGLKT
LTVLETAVKLIRRRGIEIDLATIPLDDPETYAMLSRGEVVGVFQVESAGMRKALIGMRPD
CIEDIIALVALYRPGPMENIPTYNARKHGEEEMASIHPKIDHLVKETQGVIVYQEQVMQI
AQELSGYSLGEADLLRRAMGKKIRAEMDKQRERFVSGAVERGVGKPQADFIFDLLAKFAD
YGFNKSHAAAYAVVSYQTAYLKAHYPVEFLAASMTLDMGNTDKLADFRQDALRLGIEVLA
PSVTSSFRPFEVGENRIYYSLAALKGVGDAAVEHIVAQRGEKPFKNLADFCERVDPKIVG
KRVFESLIMAGALDCFGHDRASMMAGVERMMGLASLAQQNAVSGQHDIFGASLGAQSQAL
NLPATEPWLAADRLHREFQVVGFYLSAHPLDEYKAALQKMRVQTWAEFSAAVKRGAAAGR
LAGTVTSKQERKTRTGNKMGVIAFSDTSGQYEAVLFSEGLAQYRDLLEAGRSVVITVAAE
DRPEGVNLRINSVQSLEDEASRIQKALRIFVRNATPINTLAGQLTVRGEGQVSFVLIKEE
GEGEIEIELPNRYRISPQIASAMRAVPGVVEVELV
NT seq
3528 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgaaaaactcccccgcgatcccttgaagcgagaagcggcgattgctgcggcg
cggccggaggccccggcgcggcccttcgtccatttgctcgtgcattcggcctattcgctg
ctggaaggcgccttgcagatcggcaaggtggtggctcatgcggtcaaggacgaagccccg
gccatcgccgttaccgacaccaacaacctgtttggcgcgctcgaattcgcgcagaaggcg
gtgaaggacggcatccagccgatcatcggctgccagacggcgctcgccttttccggcgaa
aacagcgatggccagcgcgaccgccgacggcaaggtcccgatatgcggccggtcgttctg
cttgccgcgaccgaggcgggctattccaatctggtcaggctggtcagccgcgtctacctc
gaaacgccgccgggcgaagccgtgcacctgaccacggaaatgatggaaggctattgtgac
gggttgatctgcctcagcggcggaccgcgcggaccgatcggcaccgcgctcaaggaagat
cgccgcgatctggccgaagcccggcttctgactctcaaggagatgttcggcgaccggctc
tatgtcgagcttgatcgggtttccggttatgatcgcgtgatcgaaaaatcctcgatcgat
ctggcctatgcccatgaactgccgctggtcgccaccaacgaggcgttcttttcctctcgc
gacgactatgacgcacatgacgcgctgattgccattgccgagggatcggtcgttgccgcc
gacaaccgccgccggctgtcgcccgacaatttcctgcgcagccaggccgatatggcaagg
ctctttgccgacctgccggaggcgatcgacaacactgtcgagatcgcgctgcgctgctcc
tattacccgaagaaccgcaatccgatcctgccgcgcttcaccggcggcgatgtcgccgac
aatgacgccgccgtgcaggcggaagccgacgaactggcccgccaggcccatgaggggctc
gacgcgcgccttgccatgcatggcccgaccgcgggctatacggtcgagcaataccgcgag
cggttgaacttcgagcttggcatcatcaccaagatgaagtttcccggctacttcctgatc
gttgccgacttcatcaaatgggccaaggcgcaaggcattccggtcgggcctggccgcggt
tcgggcgcaggctcgctggtcgcctattcgaccaccatcaccgacattgatccgctgcgc
ttctcgctgctgttcgagcgcttcctcaatcccgaccgcgtgtcgatgcccgacttcgac
atcgacttctgccaggatcggcgcgaggaggtcatccgctacgtccagcagaaatacggc
cgcgaccaggtcggccagatcatcaccttcggtacgctgcaggcgcgcgccgtgctgcgc
gacgtcggccgcgtcctgcaaatgccctatggccaggtcgacaagctctccaagatggtg
ccgcagaacccggccaatccggtcaagctcgccgacgccatcgccaacgagccgcgcttt
gccgaagaggccgagagggagccgatcgttcagacgctgctcgacatggcgcagaagctg
gaaggcctctaccgccatgcctcgacgcacgccgccggcatcgtcatcggcgaccggccg
ctctcggagctggtgccgatgtaccgcgatccgcgctcggacatgcccgtcacccagttc
aacatgaaatatgtcgagcaggccggactggtgaagttcgacttcctcggcctgaagacg
ctgaccgtgctggagacggcggtgaagctgatccgccggcgcggcatcgagatcgacctg
gcaaccatcccgctcgacgatcccgagacctacgccatgctgtcgcgcggcgaagtggtc
ggcgtgttccaggtggaaagtgccggcatgcgcaaggcgctgatcggcatgcggcccgac
tgcatcgaggacatcatcgcgctggtcgcactgtatcgacccggcccgatggaaaacatc
ccgacctacaacgcccgcaagcatggcgaggaggagatggcctcgatccatcccaagatc
gaccatctggtgaaggagacgcaaggcgtcatcgtctaccaggaacaggtgatgcagatc
gcgcaggagctgtcgggctactcgctcggcgaagccgatctgctgcgccgcgccatgggc
aagaagattcgcgccgagatggacaagcagcgcgagcgcttcgtctccggcgcggtcgag
cgtggcgtcggcaagccgcaagccgacttcattttcgacctgctggccaagttcgctgac
tatggtttcaacaaatcgcacgccgccgcctatgcggtggtttcataccagaccgcctat
ctcaaggcgcattatccggtcgagttcctggcggcgtcgatgacgctcgacatgggcaac
accgacaagctcgccgatttccgccaggacgcgctgcgcctcggcatcgaggttctggcg
ccgtcggtgacatcgagctttcgccccttcgaggtcggtgagaaccgcatctattattcg
ctggcagcgctcaagggcgtcggcgacgcggcggtcgagcacatcgttgcccagcgtggc
gaaaagccgttcaagaacctcgccgatttctgcgagcgggtcgatcccaagatcgtcggc
aagcgcgtcttcgaaagcctgatcatggccggcgcgctcgactgcttcggccacgaccgc
gcgtcgatgatggcgggcgtggaacgcatgatggggctggcgtcgctggcgcagcagaac
gcggtttccggacagcacgacatcttcggcgcctcgctcggcgcccagtcgcaggcactc
aatctgccggcgacagagccgtggctcgccgccgaccggctgcaccgtgaattccaggtg
gtcggcttttacctctcggcccacccgctcgacgagtacaaggcggccctgcagaagatg
cgggtgcaaacgtgggccgagttctcggcggccgtcaaacgcggtgccgccgccggccgc
ctggccggcacggtgacatccaagcaggaacgcaagacgcgcaccggcaacaagatgggc
gtcatcgccttttcggatacgtcaggccagtacgaagccgtgctgttttcggaaggactg
gcacagtatcgcgacctgctcgaggccggccgctccgtcgtcatcaccgttgcggccgag
gacaggccggaaggcgtcaatctgcgcatcaactcggtgcagtcgctggaggatgaggca
agtcgcatccagaaggcgctgcgtatcttcgtgcgcaacgccacgccgatcaacacgctg
gccggccaactgaccgtcaggggcgaaggccaggtcagtttcgtgctgatcaaggaagaa
ggcgagggtgaaatcgagatagagctgccgaaccgctaccgtatctcgccgcagatcgcc
tcggcgatgcgcgcggtgccgggcgtggtcgaagtggaattggtgtga
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