Mesorhizobium ciceri CC1192: A4R28_10825
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Entry
A4R28_10825 CDS
T08712
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mcic
Mesorhizobium ciceri CC1192
Pathway
mcic03420
Nucleotide excision repair
mcic03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mcic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
A4R28_10825
03430 Mismatch repair
A4R28_10825
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mcic03400
]
A4R28_10825
Enzymes [BR:
mcic01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
A4R28_10825
DNA repair and recombination proteins [BR:
mcic03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
A4R28_10825
MMR (mismatch excision repair)
Other MMR factors
A4R28_10825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
Viral_helicase1
AAA_11
DUF3553
Motif
Other DBs
NCBI-ProteinID:
AMX93548
UniProt:
A0AB38T2T1
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All DBs
Position
2237413..2240013
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AA seq
866 aa
AA seq
DB search
MSGFSEDMPFFDEPNARPSAPSGIAARAMAARSGHNNAPDYLKGLNPEQRLAVETTEGPV
LVLAGAGTGKTRVLTTRIAHILATGKAFPSQILAVTFTNKAAREMKIRIGVLIGEGNVEG
MPWLGTFHSIGVKLLRRHAELAGLRSDFTILDTDDVVRLIKQLIQAEGLDDKRWPAKQFA
QMIDGWKNKGQGPADIAEGDARAFANGKGRELYKAYQERLKTLNACDFGDLLCHPIRIFR
ANPDVLKEYHKRFKYILVDEYQDTNTAQYMWLRLLAQRPQGKPISPLEGEIGRSSAETRA
TVNICCVGDDDQSIYGWRGAEVDNILRFDKDFPGATIIRLERNYRSTAHILGAASHLIAH
NEGRFGKTLFTDRNDPEDGKVNVHAAWDSEEEARAIGETIEAYQRQKHNLNDMAILVRAS
FQMRAFEDRFITLGLNYRVIGGPRFYERLEIRDAMAFFRVVAQGADDLAFERIVNVPKRG
LGEATIRQIHDTARALRIPMLEAAAKLAESDELKPKPRAALREVAANFERWQKALETTPH
TELAETILEESGYTDMWKNDRSVEAPGRLENLKELIRSMEEYESLRSFLEHVALVMDAEQ
NAGLDAVSIMTLHSAKGLEFETVFLPGWEEGLFPHQRALDEGGRSGLEEERRLAYVGLTR
AKKNLHIWFVSNRQIHGLWQSTIPSRFLEELPNAHVEVAESGNSYGGYGNSYGGGSFASG
RGGQGAGRQNPYGASRFDNVGADSEKSGAFSNTYATPGWQRAQANRTEATDRNWGSRSGH
QVERIGYGETDSGYGAGRTSVKGRTIDGELVAKSVSDKPSAFNVGDRVFHQKFGNGNISA
IEGNKLTIDFDKAGQKRVLDGFVAAV
NT seq
2601 nt
NT seq
+upstream
nt +downstream
nt
atgtccggcttttccgaagacatgccctttttcgacgaacccaatgcgcggccctcggcc
ccgtcgggtatcgccgcgcgcgccatggctgcccgcagcggacacaacaacgcacccgac
tatctgaagggcctcaacccggagcagcggctagctgttgaaacaacggagggcccggtt
ctggtgttggccggcgccggcaccggcaagacccgcgtgctcacgacccgcatcgcccac
atcctcgccaccggcaaggcgtttccgtcgcagatcctcgcggtgaccttcaccaacaag
gccgcgcgcgagatgaagatccgcatcggcgtgctgatcggcgaaggcaatgtagagggc
atgccgtggctcggcaccttccactcgattggagtgaagctgcttcgcagacatgccgaa
ctcgccggcctgcgctccgacttcaccatcctcgacaccgacgacgtcgtgcggctgatc
aagcagctgatccaggccgaaggtctggacgacaagcgctggccggccaagcagttcgcc
cagatgatcgacggctggaagaacaaggggcaaggccccgccgacattgccgagggcgac
gcgcgcgccttcgccaacggcaagggccgcgaactctacaaggcctatcaggagcggctg
aagacgctgaacgcctgcgatttcggcgacctgctctgccacccgatccgcatcttccgc
gccaatccggacgtgctgaaggaataccataagcgcttcaagtacatcctcgtcgacgag
taccaggacaccaacaccgcccagtacatgtggctgcggctgttggcgcaaaggcctcaa
ggcaagccgatctccccccttgagggggagattgggcgctcttcggccgaaacccgcgcc
accgtaaacatctgctgcgtcggcgatgacgaccaatccatctatggctggcgcggcgcc
gaggtcgacaacatcctgcgtttcgacaaggattttcccggcgccaccatcatccggctg
gagcgcaactaccgctcgaccgcgcacatccttggtgccgcctcccacctcatcgcccac
aatgagggccgcttcggcaagacgctgttcacggatcgcaacgatcccgaggatggcaag
gtcaatgtccacgccgcctgggattccgaagaagaagcccgcgccatcggcgagaccatc
gaggcctatcagcgccagaagcacaatctcaacgacatggctattcttgtccgtgcatcc
ttccagatgcgggccttcgaggatcgcttcatcacactcggcctcaactaccgcgtcatc
ggtggcccgcgcttctacgagcgcctggaaatccgcgacgccatggctttcttccgtgtc
gtcgcgcagggcgccgacgacctcgctttcgagcgcatcgtcaatgtgcccaagcgcggc
ttgggcgaagccaccatccgccagatccacgacaccgcccgtgcgctgcgcatccctatg
ctggaggccgccgccaagctcgccgaaagcgacgagttgaagccgaagccgcgcgccgcc
ttgcgcgaagtggcggccaatttcgagcgctggcagaaggcgctggaaaccacgccgcac
accgaactcgccgagaccattctcgaagagagcggctacacggacatgtggaagaacgac
cgctcggtggaagcccccggccggctggagaacctgaaagagctgatccgctcgatggag
gagtacgaatcgctgcgctccttcctcgagcacgtcgcgctggtcatggacgccgaacag
aatgccgggctcgacgccgtctcgatcatgacgctgcattcggccaagggcctcgaattc
gagaccgtcttcctgcccggctgggaggaaggcctgttcccgcatcagcgcgcgctcgac
gaaggcggccgctccgggctggaggaagagcgccgcctcgcctatgtcggcctgacgcgg
gccaagaagaacctgcatatctggtttgtctccaaccgccagatccatggcctgtggcag
tcgacgatcccgtcgcgtttcctcgaggaattgccgaacgcccatgtcgaggtcgctgaa
agcggcaactcctacggcggctacggcaattcctatggcggcggttcctttgcctccggc
cgcggcggccagggcgcaggacggcagaacccctatggcgcctcgcgcttcgacaatgtc
ggcgccgacagcgaaaaatccggcgccttctccaacacctatgcgacgccgggctggcag
cgggcgcaggccaaccgcaccgaggcgaccgaccgcaactggggttcgcgctccggccac
caggtcgagcgcatcggctacggcgagacggacagcggctacggcgccggccgcacctcg
gtcaagggccgcaccatcgacggcgaactggtcgccaaatccgtctccgacaagccgtcc
gccttcaacgtcggcgaccgtgtcttccaccagaaattcggcaacggcaacatctcggcc
atcgaaggcaacaagctgaccatcgacttcgacaaagccggccagaaacgcgtgctggac
gggtttgtcgccgcggtgtga
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