Mesorhizobium ciceri CC1192: A4R28_15710
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Entry
A4R28_15710 CDS
T08712
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
mcic
Mesorhizobium ciceri CC1192
Pathway
mcic03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mcic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
A4R28_15710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mcic03400
]
A4R28_15710
DNA repair and recombination proteins [BR:
mcic03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
A4R28_15710
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
A4R28_15710
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_22
Kinesin
SWI2_SNF2
Microtub_bd
DUF87
Motif
Other DBs
NCBI-ProteinID:
AMX94425
LinkDB
All DBs
Position
3178488..3181625
Genome browser
AA seq
1045 aa
AA seq
DB search
MAKSPDQKTPPTANDDRAAPKRRSPLTDFLDASEPLHKGGFAEMPQPELSGTPLTGSIAD
WAEQIEQEAENEGRLVAKGDGGKSPKPSKKIPERSSSPGRSSRGTSMGGAASARERTAAG
LNPVAGLDISLEDAETMASGSVTATVAALSALIESGNPLHKDGVLWTPHRPARPEKSEGG
IAIKMVSEFEPAGDQPTAIKDLVEGVDNHDRTQVLLGVTGSGKTFTMAKVIEETQRPALI
LAPNKTLAAQLYSEFKKFFPENAVEYFVSYYDYYQPEAYVPRTDTFIEKESSINEQIDRM
RHSATRSLLERDDVIIVASVSCIYGIGSVETYTAMTFQMQIGDRLDQRALLADLVAQQYK
RQDINFVRGSFRVRGDTIEIFPAHLEDRAWRISMFGDEIEQITEFDPLTGQKTGELKSVK
IYANSHYVTPRPTLNQAIKSIKEELKHRLVELERAGRLLEAQRLEQRCRFDLEMLEATGS
CAGIENYSRYLTGRQPGDPPPTLFEYIPDNALVFIDESHVTVPQIGGMYRGDFRRKATLA
EYGFRLPSCMDNRPLRFEEWDAMRPLSVAVSATPGAWEMEQAGGVFAEQVIRPTGLIDPP
VEVRPAKSQVDDVVGEIRDTTKAGYRTLVTVLTKRMAEDLTEYLHEQGIRVRYMHSDIDT
LERIEILRDLRLGAFDVLVGINLLREGLDIPECGFVAILDADKEGFLRSETSLIQTIGRA
ARNVDGKVILYADQVTGSMERAMAETNRRREKQMEWNAANGITPESVKSRISDILDSVYE
KDHVRADISQFTDGAGAMMGNNLKAHLDAMEKQMRDAAANLDFEKAARIRDEIKRLREME
LSISEDPLAKYADMESPASGREKGKHNKGVAKHRTAEEQERFRKLDAARAAEEAAKAARP
NLFRKPDLDEMGADGTVPVKKPLFSKPSIDDMGPGTDMPTPAGAVSRSLFKKQSASEAHG
SDFGIPGDATKPLFKKNSLDEMTVRRTEKPIEGKVPAKPQPISPLVGDESAKPVVRQRTG
IGSYEDPADARREKRRPGKTGRPGK
NT seq
3138 nt
NT seq
+upstream
nt +downstream
nt
atggccaaatctcccgatcagaaaacgccgccgacggcgaatgacgaccgcgccgcgccg
aagcggcgcagcccgctgaccgatttcctcgacgcctccgagccgctgcacaaaggcggc
ttcgccgagatgccgcagccggagctctctggcacgccgctgaccggttcgatcgcggat
tgggccgagcagatcgagcaggaagccgaaaacgaaggacgtcttgtcgccaagggtgac
ggcggcaaatcgccgaagccgtcgaagaagatacccgagcgctcaagctcgccggggcgc
agttcgcgcggcacctcgatgggtggcgcggcgtcagccagggagcgcacggcagccggc
ctcaatccggtcgccggcctcgacatctcgctggaggacgccgagaccatggcctcgggc
agcgtcaccgcgacggtggcggcactgtcggcgctgatcgaatccggcaatccgctgcac
aaggacggcgtgctgtggacgccgcaccgccctgcccgccccgaaaaatccgaaggcggc
atcgccatcaagatggtgtcggagttcgagccggccggcgaccagccgaccgcgatcaag
gatctggtcgaaggcgtcgataaccacgaccgcacccaggtgctgctcggcgtcaccggc
tcaggaaaaaccttcaccatggccaaggtgatcgaggagacgcagcgccctgccttgatc
ctggcgccgaacaagacgcttgccgcgcagctctattccgagttcaagaaattcttcccg
gaaaacgccgttgagtatttcgtctcctactacgattattaccagccggaagcctacgtc
ccgcgcaccgacactttcatcgagaaggaatcctcgatcaacgagcagatcgaccgcatg
cgccactcggcgacgcgttcgctgcttgagcgcgacgacgtcatcatcgtcgcctcggtg
tcctgcatctacggtatcggctcggtcgaaacctatacggcgatgaccttccagatgcag
atcggcgaccggctcgaccagcgcgcgctgctcgccgatctcgtcgcccagcagtacaag
cggcaggacatcaactttgtccgcggctcgttccgcgtgcgcggcgacaccatcgaaatc
ttcccggcccacctggaagaccgcgcctggcgcatctcgatgttcggcgacgagatcgag
cagatcaccgaattcgacccgctgaccggccagaagaccggcgagctgaaaagcgtcaag
atctacgccaattcgcactatgtgacgccgcgcccgacgctgaaccaggcgatcaagtcg
atcaaggaagagctcaagcaccggctggtcgaactcgaacgcgccggccgcctgcttgag
gcacagcggctggaacagcgctgccgcttcgacctcgaaatgctggaagccaccggctcg
tgcgccggcatcgagaactattcgcgctatctcaccggccgccagccgggcgatccgccg
ccgacgctgtttgagtacatccccgacaacgcactggtcttcatcgacgaaagccatgtc
accgtgccgcagatcggcggcatgtatcgcggcgactttcgccgcaaggcgacgctggcc
gaatacggcttccgtctgccgtcctgcatggacaaccggccgctgcgcttcgaggagtgg
gatgccatgcgtccgctttcggtcgcggtctcggcgacccctggcgcctgggagatggaa
caggccggcggcgtcttcgccgagcaggtcatccgtccgaccggcctgatcgatccgccg
gtcgaggtccgcccggccaagagccaggtcgacgatgtcgtcggcgagattcgcgatacc
accaaggccggctaccgcaccttggtcaccgtgctgaccaagcgcatggccgaggatttg
accgagtatctgcatgagcagggcatccgcgtccgctacatgcactccgacatcgatacg
ctggagcgcatcgagatcctgcgcgatctgcgcctcggcgccttcgacgtgctggtcggg
atcaatcttctgcgcgaaggcctcgacattcccgaatgcggcttcgtcgccattctcgac
gccgacaaggaaggtttcctgcgatcggaaacctcgctgatccagaccatcgggcgcgcc
gccagaaacgtcgacggcaaggtcatcctctatgccgaccaggtgaccggctcgatggaa
cgggcgatggccgaaaccaaccgtcgccgcgaaaagcagatggagtggaacgcggccaac
ggcatcacaccggaatcggtcaagtcgcgcatctccgacattctcgattcggtctacgag
aaggaccacgtccgcgccgatatctcgcagttcaccgacggtgccggcgccatgatgggc
aacaacctcaaggcccatctcgacgcgatggaaaagcagatgcgcgatgccgcggccaat
ctcgacttcgagaaggcggcccgcatccgcgacgaaatcaagcgcctgcgtgagatggaa
ctgtccatctccgaagacccgctggccaaatacgccgacatggaaagcccggcctccggc
cgcgaaaagggcaagcacaacaagggcgtggccaaacatcgtacagcagaggaacaggag
cgttttcgcaagctcgacgcagcgcgtgccgccgaagaggcagccaaggctgcccggccc
aacctcttccgcaagcctgatctcgacgagatgggcgccgatggcactgtgccggtgaaa
aagccgctgttttcgaaaccctcgatcgacgacatgggtccaggtaccgacatgccgacg
ccggccggcgcggtgtcgcgctcgctgttcaagaaacagtcggcatccgaggcacatggt
tccgatttcggcattcccggggacgccacaaagccgctgttcaagaagaactcgctggac
gagatgacggtgcggcggacggaaaaaccgatcgaaggaaaagtgccggccaagccgcag
ccaatctcccccctcgtgggggacgaatccgccaagccagttgttcgccagcgaacaggc
attggctcctacgaagaccccgccgacgcccgtcgggaaaagcgccggccgggtaagacg
ggtaggccgggaaagtag
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