Mesorhizobium ciceri CC1192: A4R28_16740
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Entry
A4R28_16740 CDS
T08712
Name
(GenBank) DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mcic
Mesorhizobium ciceri CC1192
Brite
KEGG Orthology (KO) [BR:
mcic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mcic03032
]
A4R28_16740
03400 DNA repair and recombination proteins [BR:
mcic03400
]
A4R28_16740
Enzymes [BR:
mcic01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
A4R28_16740
DNA replication proteins [BR:
mcic03032
]
Prokaryotic type
DNA Topoisomerases
A4R28_16740
DNA repair and recombination proteins [BR:
mcic03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
A4R28_16740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
AMX94600
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All DBs
Position
complement(3403668..3404774)
Genome browser
AA seq
368 aa
AA seq
DB search
MLQKSGMSPGRPAGEDAVSPDGVFKNGAQSSADHASLSYVSDAEPGIRRLKTGKGFSYKG
PDGRTVSDATKARIEAIVIPPAWTDVWISPDADGHIQATGRDQRGRKQYRYHPQWAEERD
GAKYSSLVAFAESLPDLRHRVDSDLRRRGLPFERVVAAVVWLLDNTMIRVGNAAYARDNK
SFGLTTLRDRHVDIVGSSLRFAFKGKSGKEWKLKLADRRIARIVRGAQDLPGQKLFQYLD
EDGDRRPVRSEDVNRYIREAVGDAFSSKHFRTWGGTIHAASLFAQTELPQSQAQRNRAMN
SVIDKVAERLGNTRAVCRKCYIHPRVFEAWSEGRLLDEMAQANKRKRAIAGLDDEEALVL
RWLKLGES
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgttgcagaaatccggaatgtcgcccggccgaccggctggcgaggacgctgtatcgcca
gatggcgtgttcaaaaacggggcacaaagctcggccgatcatgcgtcgcttagttatgtc
agcgatgccgagcctggtatccggcggctgaagacaggcaaggggttttcctacaaggga
ccggacggacggacggtttcggacgccaccaaagcccgcatcgaggcgatcgtcattccg
ccggcctggacggatgtgtggatttcgcccgacgcggacggccatatccaggcaaccggc
agggaccagcggggacgcaagcaatatcgttatcatccgcaatgggccgaagagcgcgat
ggtgccaaatattcgagccttgtcgctttcgccgagagcctgccggacctgcggcacagg
gtcgatagcgatctgcgccgtcgtggcttgccgttcgagcgtgtcgtcgccgcggtcgtc
tggctgctcgacaacacgatgatccgcgtcggcaatgccgcctacgcccgcgacaacaag
agtttcgggctgaccacgttgcgcgaccggcatgtcgatattgtcggttcaagcctgcgc
tttgccttcaagggcaagtcgggcaaggagtggaagctgaagctggccgaccgccgtatc
gccaggattgtgcgtggcgcgcaggacctgccaggccagaagctgttccagtatctcgat
gaggacggcgacaggcggccggtccgctccgaggacgtcaaccgctatatccgtgaggcg
gtcggtgacgccttcagttcgaagcatttccgcacctggggcggcaccattcacgccgcg
tcgctgtttgcgcaaacggaactgccgcaaagccaggcgcagcgaaacagggcgatgaac
agcgtcatcgacaaggttgccgaacggctgggcaatacgcgtgccgtctgccgcaaatgc
tatatccatccgcgggtcttcgaagcgtggtccgagggacggttgctggatgaaatggcg
caggccaacaagcgcaaacgggcgattgccggtctcgatgacgaggaagctctcgtgctg
cgatggctgaaactgggagaaagctga
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