Mesorhizobium ciceri CC1192: A4R28_18150
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Entry
A4R28_18150 CDS
T08712
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
mcic
Mesorhizobium ciceri CC1192
Pathway
mcic03030
DNA replication
mcic03410
Base excision repair
mcic03420
Nucleotide excision repair
mcic03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mcic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
A4R28_18150
03410 Base excision repair
A4R28_18150
03420 Nucleotide excision repair
A4R28_18150
03440 Homologous recombination
A4R28_18150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mcic03032
]
A4R28_18150
03400 DNA repair and recombination proteins [BR:
mcic03400
]
A4R28_18150
Enzymes [BR:
mcic01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
A4R28_18150
DNA replication proteins [BR:
mcic03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
A4R28_18150
DNA repair and recombination proteins [BR:
mcic03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
A4R28_18150
NER (nucleotide excision repair)
GGR (global genome repair) factors
A4R28_18150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
HHH_5
DNA_polI_exo1
Taq-exonuc
WHD_BrxR
HHH
HHH_2
IMS_HHH
Motif
Other DBs
NCBI-ProteinID:
AMX97273
LinkDB
All DBs
Position
3703126..3706077
Genome browser
AA seq
983 aa
AA seq
DB search
MKKGDHLFLVDGSGYIFRAYHALPPLTRKSDGLPVGAVSGFCNMLWKLMLDARNTDVGIV
PTHFAVIFDYSSKTFRNDLYPEYKANRSAPPEDLIPQFGLIRQATRAFNLPCVEIEGYEA
DDLIATYARLACEAGGDTTIISSDKDLMQLVGDTVAMYDPMKDRQIGIPEVIEKWGVPPE
KMVDLQALTGDSVDNVPGVPGIGPKTAAQLLEQFGDLDTLLARAGEIKQDKRRESIIANA
DKARISRQLVTLMNDVPVTEGLEDFVLHAPDGPKLIGFLKTMEFTSLTRRVAEATSTEAG
DVQAVAVTVERADHAHGPDVGAGLPPVARNAPGTEPDEAGGTAETSKQGDTPSLLAALRL
ERAATGKIDISAYHCIRDISTLKAWVAEAREAGIAAFDVRATSADPMQAELIGMAIATAP
GRAAYIPFAHMSGNGDLLGGGALENQIPLREALAVLKPLLEDRSVLKIAQNLKYDLVIMS
RYGIDVAPFDDTMLISYVLDAGTPHGHGMDALAEKWLGHTPLQLKDVTGSGKSSVGFDQV
DIDKATAHAAEDADVTLRLWLVLKPRLAAKGLVSVYERLERPLVPVLARMEQRGISVDRQ
ILSRLSGELAQGAARLEEEIYQLIGERINIGSPKQLGDILFGRMGLPGGSKTKTGQWSTS
AQLLEDLAAEGHELPRKIVDWRQLTKLKSTYTDALPGFIHPDTKRVHTSYALAATTTGRL
SSSDPNLQNIPVRTAEGRKIRTAFITDKSHRLVSADYSQIELRVLAHVAEIPQLRQAFAD
GADIHAITASEMFNVPVEGMPSEVRRRAKAINFGIIYGISAFGLANQLSIPREEAGNYIK
KYFERFPGIRDYIEETKAYAREHGFVETIFGRRIHYPDIRSSNPSLRAFNERASINARLQ
GTAADIIRRAMIRMEEALEKAGLSARMLLQVHDELIFETVEAEVEATIPVVRHVMENAAM
PAVSMSVPLHVDARAANNWDEAH
NT seq
2952 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaggcgatcatctcttccttgtcgacggctccggctacatcttccgtgcctat
cacgcgctgccgccgctgacccgcaaatccgacggcctgccggtcggcgccgtttccggc
ttctgcaacatgctgtggaagctgatgctcgacgcccgcaataccgatgtaggcatcgtg
ccgacgcatttcgccgtcattttcgactattcgtcaaaaaccttccgcaacgacctctac
cccgaatacaaggccaaccgctcggcaccgccggaagatttgatcccgcaattcggcctg
atccgccaggcgaccagggcgttcaacctgccctgcgtcgagatcgaaggctacgaggct
gacgatctgatcgccacctatgcgaggctcgcctgcgaagccggcggcgataccaccatc
atctcctccgataaggatttgatgcaactggttggcgatacggtcgccatgtacgacccg
atgaaggaccgccagatcggaattccggaggtcatcgagaaatggggcgtgccgccggag
aagatggtcgacctgcaggcactgaccggcgattcggtcgacaatgtgcctggtgtgccc
ggcatcgggccgaagacggcggcgcaactgctcgaacagttcggtgacctcgacacgctg
ctggcccgggccggcgagatcaagcaggacaagcgccgggaatcgatcatcgccaacgcc
gacaaggcgcgcatttctcgtcagctggtgacgctgatgaacgacgtaccggtgaccgag
ggtctggaggatttcgtcctgcacgcgcccgacggcccgaagctgatcggtttcctcaag
accatggaattcacctcgctgacccgccgtgtcgcggaagcgaccagcaccgaggccggc
gacgtccaggccgtcgcggtcaccgtcgaacgcgccgatcatgcccatggcccggacgtt
ggcgccggtttgccgccggttgcccgaaacgcgcctggcactgaaccggacgaagccggc
gggacggcggagacgtcaaaacaaggcgataccccctccctgctcgcggcactaaggctg
gagcgcgcggccaccggcaagatcgacatttcggcctatcactgcatccgcgatatctcg
accctgaaagcctgggtcgccgaggcacgggaggctggcatcgccgccttcgacgtcagg
gcgacatccgccgatccgatgcaggcggaactgatcggcatggccatcgccacggctccc
ggacgcgccgcctacattcccttcgcccacatgagcggcaatggcgacctgctcggtggt
ggcgcgctcgaaaaccagattccgctgcgcgaggcgctggcggtgctgaaaccgctgctc
gaagacagatcggttctcaagatcgcgcagaacctgaaatacgatcttgtcatcatgagc
cgctacggcatcgatgtcgcaccgttcgacgacaccatgctgatctcctacgtgctcgat
gccggtacgccccatggtcacggcatggatgcgcttgccgaaaagtggctcggtcatact
cctcttcagctcaaggacgtgaccggctcgggcaaaagctcggtcggtttcgatcaggtc
gacatcgacaaggcgacggctcatgccgccgaagacgccgatgtgacgctgcggctctgg
ctggtgctgaaaccgcggcttgccgccaagggcctggtgtcggtctatgagcggctggag
cggccgctggtgccggtgctggcgcgcatggaacagcgcggcatctcggtcgacaggcag
atcctctcgcggctctccggcgaattggcgcagggcgccgctcgcctcgaagaggaaatc
taccagctcatcggcgaacgcatcaacatcggttcgccaaagcagctcggcgacatcctg
ttcgggcgcatgggcctgcccggcggttcgaagaccaagaccggccagtggtcgacctcg
gcgcagcttctcgaagatctcgctgccgaaggtcacgaactgccgcgcaagatcgtcgac
tggcgccagctgaccaagctgaaatcgacctataccgatgcgctgcccggcttcatccac
cccgacaccaagcgcgtccacacctcctacgcgttggccgctacgacgacgggacgcctg
tcatcctccgatccgaacctgcagaacatcccggtgcgcaccgccgagggccgcaagatc
aggaccgccttcatcaccgacaagagccatcggctggtctcggccgactacagccagatc
gaattgcgggtgctcgcccatgtcgccgagatcccgcaactgcggcaggctttcgccgac
ggcgccgacatccacgccatcaccgcgtcggagatgttcaacgtgccggtcgaaggcatg
ccctcggaggttcgccgccgcgccaaggcgatcaatttcggcatcatctacggcatttcg
gccttcggtctcgccaaccagctgtcgatcccgcgcgaggaagccggcaactacatcaag
aaatatttcgagcgcttccccggcatccgcgattacatcgaggagaccaaggcctatgcc
cgcgagcacggctttgtcgaaacgatcttcggccgccgcatccattaccccgacataaga
tcgtccaacccctcgctccgcgccttcaacgaacgcgcctcgatcaatgcccgcctgcaa
ggcaccgccgccgacatcatccgccgtgccatgatccgcatggaggaggcgctggaaaaa
gcaggcctttcggcacgcatgctgctgcaggtgcatgacgaactgatcttcgagaccgtc
gaggcggaagtcgaggcgacgatcccggtcgtgcgtcatgtcatggaaaacgcggcgatg
ccggcggtctcaatgtcggtgccgctgcatgtcgacgcgcgagccgccaacaactgggac
gaggcgcattag
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